Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Tgfbr3O88393 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Tgfbr3O88393 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tgfbr3O88393 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tgfbr3O88393 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tgfbr3O88393 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Tgfbr3O88393 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tgfbr3O88393 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC18.82■□□□□ 0.6
Tgfbr3O88393 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tgfbr3O88393 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tgfbr3O88393 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC18.82■□□□□ 0.6
Tgfbr3O88393 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC18.82■□□□□ 0.6
Tgfbr3O88393 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC18.82■□□□□ 0.6
Tgfbr3O88393 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Tgfbr3O88393 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tgfbr3O88393 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Tgfbr3O88393 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tgfbr3O88393 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Tgfbr3O88393 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tgfbr3O88393 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tgfbr3O88393 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tgfbr3O88393 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tgfbr3O88393 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC18.81■□□□□ 0.6
Tgfbr3O88393 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Tgfbr3O88393 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tgfbr3O88393 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Tgfbr3O88393 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tgfbr3O88393 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tgfbr3O88393 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tgfbr3O88393 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Tgfbr3O88393 Lsm12-201ENSMUST00000021297 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tgfbr3O88393 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Tgfbr3O88393 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tgfbr3O88393 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tgfbr3O88393 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
Tgfbr3O88393 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tgfbr3O88393 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Tgfbr3O88393 Gm26766-202ENSMUST00000227544 2347 ntBASIC18.79■□□□□ 0.6
Tgfbr3O88393 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC18.79■□□□□ 0.6
Tgfbr3O88393 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tgfbr3O88393 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tgfbr3O88393 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tgfbr3O88393 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tgfbr3O88393 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tgfbr3O88393 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tgfbr3O88393 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tgfbr3O88393 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tgfbr3O88393 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC18.78■□□□□ 0.6
Tgfbr3O88393 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tgfbr3O88393 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Tgfbr3O88393 Gm42555-201ENSMUST00000199304 1039 ntBASIC18.78■□□□□ 0.6
Tgfbr3O88393 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC18.78■□□□□ 0.6
Tgfbr3O88393 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tgfbr3O88393 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tgfbr3O88393 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.78■□□□□ 0.6
Tgfbr3O88393 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tgfbr3O88393 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Tgfbr3O88393 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.77■□□□□ 0.6
Tgfbr3O88393 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Tgfbr3O88393 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.77■□□□□ 0.6
Tgfbr3O88393 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC18.77■□□□□ 0.6
Tgfbr3O88393 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC18.77■□□□□ 0.6
Tgfbr3O88393 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC18.77■□□□□ 0.6
Tgfbr3O88393 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.77■□□□□ 0.6
Tgfbr3O88393 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Tgfbr3O88393 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC18.77■□□□□ 0.6
Tgfbr3O88393 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC18.77■□□□□ 0.6
Tgfbr3O88393 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Tgfbr3O88393 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
Tgfbr3O88393 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Tgfbr3O88393 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Tgfbr3O88393 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.59
Tgfbr3O88393 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Tgfbr3O88393 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Tgfbr3O88393 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tgfbr3O88393 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tgfbr3O88393 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tgfbr3O88393 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tgfbr3O88393 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tgfbr3O88393 Gm12441-201ENSMUST00000121806 588 ntBASIC18.76■□□□□ 0.59
Tgfbr3O88393 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC18.76■□□□□ 0.59
Tgfbr3O88393 Mir5133-201ENSMUST00000174955 77 ntBASIC18.76■□□□□ 0.59
Tgfbr3O88393 Gm6277-202ENSMUST00000224036 2779 ntBASIC18.76■□□□□ 0.59
Tgfbr3O88393 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tgfbr3O88393 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tgfbr3O88393 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Tgfbr3O88393 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Tgfbr3O88393 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tgfbr3O88393 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tgfbr3O88393 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.75■□□□□ 0.59
Tgfbr3O88393 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
Tgfbr3O88393 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC18.75■□□□□ 0.59
Tgfbr3O88393 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tgfbr3O88393 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tgfbr3O88393 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
Tgfbr3O88393 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Tgfbr3O88393 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tgfbr3O88393 1700123O20Rik-201ENSMUST00000038539 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Tgfbr3O88393 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Tgfbr3O88393 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 132.1 ms