Protein–RNA interactions for Protein: O70507

Hcn4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, mousemouse

Predictions only

Length 1,186 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn4O70507 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hcn4O70507 Gm7290-201ENSMUST00000104990 617 ntBASIC20.96■□□□□ 0.95
Hcn4O70507 Gm11643-201ENSMUST00000119578 864 ntBASIC20.96■□□□□ 0.95
Hcn4O70507 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hcn4O70507 Gm12918-201ENSMUST00000120234 636 ntBASIC20.96■□□□□ 0.95
Hcn4O70507 Gm15710-201ENSMUST00000121821 636 ntBASIC20.96■□□□□ 0.95
Hcn4O70507 Gm5075-201ENSMUST00000196916 622 ntBASIC20.96■□□□□ 0.95
Hcn4O70507 Arhgef33-211ENSMUST00000225658 473 ntBASIC20.96■□□□□ 0.95
Hcn4O70507 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Hcn4O70507 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC20.96■□□□□ 0.95
Hcn4O70507 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC20.96■□□□□ 0.95
Hcn4O70507 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hcn4O70507 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hcn4O70507 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hcn4O70507 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hcn4O70507 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Hcn4O70507 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Hcn4O70507 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Hcn4O70507 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Hcn4O70507 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Hcn4O70507 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Hcn4O70507 Gm45709-201ENSMUST00000213052 1075 ntTSL 5 BASIC20.95■□□□□ 0.94
Hcn4O70507 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hcn4O70507 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hcn4O70507 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hcn4O70507 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hcn4O70507 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hcn4O70507 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Hcn4O70507 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hcn4O70507 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Hcn4O70507 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hcn4O70507 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC20.94■□□□□ 0.94
Hcn4O70507 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC20.94■□□□□ 0.94
Hcn4O70507 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
Hcn4O70507 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Hcn4O70507 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hcn4O70507 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hcn4O70507 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hcn4O70507 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
Hcn4O70507 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hcn4O70507 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Hcn4O70507 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC20.93■□□□□ 0.94
Hcn4O70507 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Hcn4O70507 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.93■□□□□ 0.94
Hcn4O70507 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hcn4O70507 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hcn4O70507 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hcn4O70507 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hcn4O70507 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC20.92■□□□□ 0.94
Hcn4O70507 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC20.92■□□□□ 0.94
Hcn4O70507 Cklf-203ENSMUST00000211809 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hcn4O70507 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hcn4O70507 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Hcn4O70507 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Hcn4O70507 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hcn4O70507 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hcn4O70507 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hcn4O70507 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
Hcn4O70507 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hcn4O70507 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.91■□□□□ 0.94
Hcn4O70507 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hcn4O70507 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hcn4O70507 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hcn4O70507 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hcn4O70507 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hcn4O70507 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hcn4O70507 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hcn4O70507 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hcn4O70507 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Hcn4O70507 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hcn4O70507 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hcn4O70507 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.9■□□□□ 0.94
Hcn4O70507 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hcn4O70507 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hcn4O70507 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Hcn4O70507 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC20.9■□□□□ 0.94
Hcn4O70507 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hcn4O70507 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Hcn4O70507 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Hcn4O70507 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Hcn4O70507 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Hcn4O70507 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Hcn4O70507 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Hcn4O70507 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Hcn4O70507 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
Hcn4O70507 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hcn4O70507 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hcn4O70507 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hcn4O70507 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
Hcn4O70507 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn4O70507 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC20.88■□□□□ 0.93
Hcn4O70507 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn4O70507 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn4O70507 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn4O70507 Paox-202ENSMUST00000097967 1024 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn4O70507 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Hcn4O70507 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Hcn4O70507 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Hcn4O70507 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Hcn4O70507 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms