Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim3O70209 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim3O70209 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim3O70209 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.86■□□□□ 0.45
Pdlim3O70209 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim3O70209 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim3O70209 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim3O70209 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Pdlim3O70209 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC17.86■□□□□ 0.45
Pdlim3O70209 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim3O70209 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
Pdlim3O70209 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC17.85■□□□□ 0.45
Pdlim3O70209 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim3O70209 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
Pdlim3O70209 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.85■□□□□ 0.45
Pdlim3O70209 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim3O70209 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim3O70209 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim3O70209 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pdlim3O70209 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.85■□□□□ 0.45
Pdlim3O70209 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.84■□□□□ 0.45
Pdlim3O70209 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim3O70209 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim3O70209 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim3O70209 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim3O70209 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim3O70209 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Pdlim3O70209 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.84■□□□□ 0.45
Pdlim3O70209 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.84■□□□□ 0.45
Pdlim3O70209 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim3O70209 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim3O70209 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim3O70209 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pdlim3O70209 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Pdlim3O70209 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pdlim3O70209 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.45
Pdlim3O70209 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pdlim3O70209 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Pdlim3O70209 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Pdlim3O70209 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Pdlim3O70209 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pdlim3O70209 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pdlim3O70209 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pdlim3O70209 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdlim3O70209 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdlim3O70209 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdlim3O70209 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdlim3O70209 Mir6236-201ENSMUST00000184437 123 ntBASIC17.82■□□□□ 0.44
Pdlim3O70209 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.82■□□□□ 0.44
Pdlim3O70209 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdlim3O70209 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdlim3O70209 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.82■□□□□ 0.44
Pdlim3O70209 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdlim3O70209 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pdlim3O70209 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Pdlim3O70209 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC17.81■□□□□ 0.44
Pdlim3O70209 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdlim3O70209 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdlim3O70209 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pdlim3O70209 Gm10232-201ENSMUST00000089221 720 ntBASIC17.81■□□□□ 0.44
Pdlim3O70209 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pdlim3O70209 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pdlim3O70209 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pdlim3O70209 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Pdlim3O70209 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
Pdlim3O70209 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdlim3O70209 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC17.8■□□□□ 0.44
Pdlim3O70209 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdlim3O70209 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pdlim3O70209 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Pdlim3O70209 Gm5921-201ENSMUST00000075898 882 ntBASIC17.8■□□□□ 0.44
Pdlim3O70209 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdlim3O70209 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pdlim3O70209 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pdlim3O70209 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim3O70209 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim3O70209 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim3O70209 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim3O70209 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
Pdlim3O70209 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim3O70209 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim3O70209 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim3O70209 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pdlim3O70209 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim3O70209 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim3O70209 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.78■□□□□ 0.44
Pdlim3O70209 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim3O70209 Cap2-205ENSMUST00000225824 1634 ntBASIC17.78■□□□□ 0.44
Pdlim3O70209 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pdlim3O70209 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Pdlim3O70209 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim3O70209 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pdlim3O70209 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pdlim3O70209 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pdlim3O70209 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pdlim3O70209 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Pdlim3O70209 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pdlim3O70209 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
Pdlim3O70209 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pdlim3O70209 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 17 ms