Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Trdmt1O55055 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.91■■□□□ 1.1
Trdmt1O55055 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trdmt1O55055 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trdmt1O55055 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Trdmt1O55055 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Trdmt1O55055 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC21.9■■□□□ 1.1
Trdmt1O55055 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trdmt1O55055 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC21.9■■□□□ 1.1
Trdmt1O55055 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.9■■□□□ 1.1
Trdmt1O55055 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Trdmt1O55055 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Trdmt1O55055 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trdmt1O55055 Slc9a7-201ENSMUST00000072451 2512 ntAPPRIS P2 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trdmt1O55055 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trdmt1O55055 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Trdmt1O55055 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC21.89■■□□□ 1.1
Trdmt1O55055 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.89■■□□□ 1.1
Trdmt1O55055 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trdmt1O55055 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Trdmt1O55055 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Trdmt1O55055 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trdmt1O55055 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Trdmt1O55055 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.88■■□□□ 1.09
Trdmt1O55055 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trdmt1O55055 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC21.88■■□□□ 1.09
Trdmt1O55055 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.88■■□□□ 1.09
Trdmt1O55055 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trdmt1O55055 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Trdmt1O55055 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Trdmt1O55055 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Trdmt1O55055 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trdmt1O55055 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trdmt1O55055 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trdmt1O55055 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.87■■□□□ 1.09
Trdmt1O55055 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC21.87■■□□□ 1.09
Trdmt1O55055 Gm42555-201ENSMUST00000199304 1039 ntBASIC21.87■■□□□ 1.09
Trdmt1O55055 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.87■■□□□ 1.09
Trdmt1O55055 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trdmt1O55055 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trdmt1O55055 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trdmt1O55055 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Trdmt1O55055 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trdmt1O55055 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Trdmt1O55055 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Trdmt1O55055 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trdmt1O55055 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC21.86■■□□□ 1.09
Trdmt1O55055 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trdmt1O55055 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC21.86■■□□□ 1.09
Trdmt1O55055 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC21.86■■□□□ 1.09
Trdmt1O55055 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Trdmt1O55055 Slc35b2-201ENSMUST00000041353 2326 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Trdmt1O55055 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trdmt1O55055 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Trdmt1O55055 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trdmt1O55055 Gm13146-201ENSMUST00000118508 780 ntBASIC21.85■■□□□ 1.09
Trdmt1O55055 Mir5133-201ENSMUST00000174955 77 ntBASIC21.85■■□□□ 1.09
Trdmt1O55055 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.85■■□□□ 1.09
Trdmt1O55055 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.85■■□□□ 1.09
Trdmt1O55055 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trdmt1O55055 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Trdmt1O55055 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Trdmt1O55055 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Trdmt1O55055 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Trdmt1O55055 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Trdmt1O55055 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Trdmt1O55055 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Trdmt1O55055 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.83■■□□□ 1.09
Trdmt1O55055 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Trdmt1O55055 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC21.83■■□□□ 1.09
Trdmt1O55055 Gm42911-201ENSMUST00000199360 1630 ntBASIC21.83■■□□□ 1.08
Trdmt1O55055 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trdmt1O55055 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
Trdmt1O55055 Polr2c-201ENSMUST00000109521 1580 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trdmt1O55055 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trdmt1O55055 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC21.82■■□□□ 1.08
Trdmt1O55055 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC21.82■■□□□ 1.08
Trdmt1O55055 Gm12441-201ENSMUST00000121806 588 ntBASIC21.82■■□□□ 1.08
Trdmt1O55055 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC21.82■■□□□ 1.08
Trdmt1O55055 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trdmt1O55055 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Trdmt1O55055 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
Trdmt1O55055 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trdmt1O55055 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
Trdmt1O55055 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trdmt1O55055 Arl4d-201ENSMUST00000039388 1382 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trdmt1O55055 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Trdmt1O55055 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trdmt1O55055 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trdmt1O55055 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trdmt1O55055 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trdmt1O55055 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
Trdmt1O55055 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trdmt1O55055 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC21.8■■□□□ 1.08
Trdmt1O55055 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC21.8■■□□□ 1.08
Trdmt1O55055 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trdmt1O55055 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trdmt1O55055 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
Trdmt1O55055 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Trdmt1O55055 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms