Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SncaO55042 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.3■□□□□ 0.2
SncaO55042 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
SncaO55042 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SncaO55042 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SncaO55042 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SncaO55042 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SncaO55042 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC16.3■□□□□ 0.2
SncaO55042 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SncaO55042 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SncaO55042 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SncaO55042 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SncaO55042 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SncaO55042 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SncaO55042 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SncaO55042 Catsper2-201ENSMUST00000038073 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SncaO55042 Ung-202ENSMUST00000102584 2136 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SncaO55042 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC16.29■□□□□ 0.2
SncaO55042 Gm7143-201ENSMUST00000222811 859 ntBASIC16.29■□□□□ 0.2
SncaO55042 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC16.29■□□□□ 0.2
SncaO55042 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SncaO55042 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SncaO55042 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SncaO55042 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SncaO55042 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
SncaO55042 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SncaO55042 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
SncaO55042 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SncaO55042 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SncaO55042 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC16.28■□□□□ 0.2
SncaO55042 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SncaO55042 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SncaO55042 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SncaO55042 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SncaO55042 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SncaO55042 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SncaO55042 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SncaO55042 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC16.27■□□□□ 0.2
SncaO55042 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SncaO55042 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SncaO55042 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
SncaO55042 Gm40881-201ENSMUST00000223397 166 ntBASIC16.27■□□□□ 0.2
SncaO55042 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SncaO55042 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SncaO55042 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SncaO55042 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
SncaO55042 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SncaO55042 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SncaO55042 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SncaO55042 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SncaO55042 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SncaO55042 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SncaO55042 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SncaO55042 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SncaO55042 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC16.26■□□□□ 0.19
SncaO55042 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SncaO55042 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SncaO55042 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SncaO55042 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC16.26■□□□□ 0.19
SncaO55042 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SncaO55042 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SncaO55042 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SncaO55042 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SncaO55042 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
SncaO55042 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SncaO55042 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SncaO55042 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SncaO55042 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SncaO55042 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SncaO55042 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC16.25■□□□□ 0.19
SncaO55042 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SncaO55042 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SncaO55042 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SncaO55042 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SncaO55042 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SncaO55042 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SncaO55042 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SncaO55042 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SncaO55042 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SncaO55042 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
SncaO55042 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SncaO55042 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SncaO55042 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC16.24■□□□□ 0.19
SncaO55042 Gm18755-201ENSMUST00000218030 1099 ntBASIC16.24■□□□□ 0.19
SncaO55042 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
SncaO55042 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SncaO55042 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SncaO55042 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SncaO55042 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.23■□□□□ 0.19
SncaO55042 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
SncaO55042 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SncaO55042 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC16.23■□□□□ 0.19
SncaO55042 Rasef-203ENSMUST00000222414 2127 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
SncaO55042 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SncaO55042 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SncaO55042 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SncaO55042 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SncaO55042 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
SncaO55042 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SncaO55042 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms