Protein–RNA interactions for Protein: O54990

Prom1, Prominin-1, mousemouse

Predictions only

Length 867 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prom1O54990 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prom1O54990 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC21.92■■□□□ 1.1
Prom1O54990 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Prom1O54990 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC21.92■■□□□ 1.1
Prom1O54990 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prom1O54990 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prom1O54990 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC21.91■■□□□ 1.1
Prom1O54990 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prom1O54990 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prom1O54990 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prom1O54990 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Prom1O54990 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC21.9■■□□□ 1.1
Prom1O54990 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prom1O54990 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.9■■□□□ 1.1
Prom1O54990 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC21.9■■□□□ 1.1
Prom1O54990 Gm7514-201ENSMUST00000209475 934 ntBASIC21.9■■□□□ 1.1
Prom1O54990 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC21.9■■□□□ 1.1
Prom1O54990 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Prom1O54990 Hck-202ENSMUST00000109799 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prom1O54990 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prom1O54990 Hck-201ENSMUST00000003370 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prom1O54990 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Prom1O54990 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.1
Prom1O54990 Gm17641-201ENSMUST00000166328 2350 ntBASIC21.89■■□□□ 1.1
Prom1O54990 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC21.89■■□□□ 1.09
Prom1O54990 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Prom1O54990 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Prom1O54990 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC21.89■■□□□ 1.09
Prom1O54990 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Prom1O54990 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prom1O54990 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.88■■□□□ 1.09
Prom1O54990 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Prom1O54990 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC21.88■■□□□ 1.09
Prom1O54990 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Prom1O54990 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prom1O54990 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prom1O54990 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
Prom1O54990 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prom1O54990 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prom1O54990 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prom1O54990 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
Prom1O54990 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC21.87■■□□□ 1.09
Prom1O54990 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prom1O54990 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prom1O54990 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC21.87■■□□□ 1.09
Prom1O54990 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prom1O54990 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC21.87■■□□□ 1.09
Prom1O54990 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Prom1O54990 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC21.87■■□□□ 1.09
Prom1O54990 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC21.86■■□□□ 1.09
Prom1O54990 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Prom1O54990 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Prom1O54990 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC21.86■■□□□ 1.09
Prom1O54990 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Prom1O54990 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
Prom1O54990 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC21.86■■□□□ 1.09
Prom1O54990 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC21.86■■□□□ 1.09
Prom1O54990 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Prom1O54990 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC21.86■■□□□ 1.09
Prom1O54990 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Prom1O54990 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
Prom1O54990 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
Prom1O54990 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC21.86■■□□□ 1.09
Prom1O54990 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC21.86■■□□□ 1.09
Prom1O54990 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prom1O54990 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.85■■□□□ 1.09
Prom1O54990 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
Prom1O54990 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prom1O54990 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC21.85■■□□□ 1.09
Prom1O54990 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC21.85■■□□□ 1.09
Prom1O54990 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prom1O54990 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC21.85■■□□□ 1.09
Prom1O54990 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prom1O54990 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prom1O54990 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prom1O54990 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Prom1O54990 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prom1O54990 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Prom1O54990 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prom1O54990 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC21.84■■□□□ 1.09
Prom1O54990 Gm12933-201ENSMUST00000120203 872 ntBASIC21.84■■□□□ 1.09
Prom1O54990 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Prom1O54990 CT030146.1-201ENSMUST00000220919 217 ntBASIC21.84■■□□□ 1.09
Prom1O54990 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prom1O54990 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prom1O54990 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC21.84■■□□□ 1.09
Prom1O54990 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC21.83■■□□□ 1.09
Prom1O54990 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Prom1O54990 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
Prom1O54990 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
Prom1O54990 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
Prom1O54990 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.83■■□□□ 1.09
Prom1O54990 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
Prom1O54990 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
Prom1O54990 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prom1O54990 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prom1O54990 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Prom1O54990 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
Prom1O54990 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
Prom1O54990 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms