Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf13O54965 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf13O54965 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf13O54965 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf13O54965 Gm7143-201ENSMUST00000222811 859 ntBASIC17.85■□□□□ 0.45
Rnf13O54965 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf13O54965 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf13O54965 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Rnf13O54965 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf13O54965 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf13O54965 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf13O54965 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf13O54965 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf13O54965 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
Rnf13O54965 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf13O54965 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC17.84■□□□□ 0.45
Rnf13O54965 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf13O54965 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf13O54965 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf13O54965 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Rnf13O54965 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.45
Rnf13O54965 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Rnf13O54965 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Rnf13O54965 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC17.83■□□□□ 0.44
Rnf13O54965 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC17.83■□□□□ 0.44
Rnf13O54965 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC17.83■□□□□ 0.44
Rnf13O54965 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf13O54965 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf13O54965 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf13O54965 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf13O54965 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Rnf13O54965 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC17.83■□□□□ 0.44
Rnf13O54965 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf13O54965 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf13O54965 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf13O54965 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Rnf13O54965 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf13O54965 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Rnf13O54965 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf13O54965 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf13O54965 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf13O54965 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf13O54965 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Rnf13O54965 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf13O54965 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Rnf13O54965 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC17.81■□□□□ 0.44
Rnf13O54965 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf13O54965 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf13O54965 Ralgps2-205ENSMUST00000185198 2229 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf13O54965 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Rnf13O54965 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf13O54965 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf13O54965 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf13O54965 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf13O54965 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf13O54965 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Rnf13O54965 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf13O54965 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf13O54965 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf13O54965 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC17.8■□□□□ 0.44
Rnf13O54965 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf13O54965 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf13O54965 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf13O54965 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Rnf13O54965 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Rnf13O54965 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Rnf13O54965 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf13O54965 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Rnf13O54965 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf13O54965 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf13O54965 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf13O54965 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
Rnf13O54965 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf13O54965 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Rnf13O54965 Gm5112-201ENSMUST00000204407 2368 ntBASIC17.79■□□□□ 0.44
Rnf13O54965 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Rnf13O54965 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC17.78■□□□□ 0.44
Rnf13O54965 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf13O54965 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Rnf13O54965 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf13O54965 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf13O54965 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf13O54965 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf13O54965 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf13O54965 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Rnf13O54965 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf13O54965 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf13O54965 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf13O54965 Rhoa-201ENSMUST00000007959 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf13O54965 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf13O54965 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf13O54965 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf13O54965 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf13O54965 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Rnf13O54965 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Rnf13O54965 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.43
Rnf13O54965 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Rnf13O54965 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rnf13O54965 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Rnf13O54965 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC17.76■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 10.3 ms