Protein–RNA interactions for Protein: O35451

Atf6b, Cyclic AMP-dependent transcription factor ATF-6 beta, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6bO35451 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Atf6bO35451 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf6bO35451 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf6bO35451 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Atf6bO35451 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC17.03■□□□□ 0.32
Atf6bO35451 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf6bO35451 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Atf6bO35451 Serbp1-207ENSMUST00000203436 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf6bO35451 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf6bO35451 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Atf6bO35451 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Atf6bO35451 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC17.02■□□□□ 0.32
Atf6bO35451 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atf6bO35451 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Atf6bO35451 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atf6bO35451 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.02■□□□□ 0.32
Atf6bO35451 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.02■□□□□ 0.32
Atf6bO35451 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Atf6bO35451 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Atf6bO35451 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Atf6bO35451 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf6bO35451 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf6bO35451 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf6bO35451 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Atf6bO35451 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.01■□□□□ 0.31
Atf6bO35451 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
Atf6bO35451 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf6bO35451 Gm43137-201ENSMUST00000198052 594 ntBASIC17.01■□□□□ 0.31
Atf6bO35451 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.01■□□□□ 0.31
Atf6bO35451 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Atf6bO35451 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf6bO35451 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Atf6bO35451 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf6bO35451 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf6bO35451 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Atf6bO35451 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC17■□□□□ 0.31
Atf6bO35451 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC17■□□□□ 0.31
Atf6bO35451 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Atf6bO35451 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17■□□□□ 0.31
Atf6bO35451 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Atf6bO35451 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17■□□□□ 0.31
Atf6bO35451 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Atf6bO35451 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Atf6bO35451 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17■□□□□ 0.31
Atf6bO35451 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Atf6bO35451 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Atf6bO35451 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Atf6bO35451 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Atf6bO35451 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Atf6bO35451 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Atf6bO35451 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Atf6bO35451 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Atf6bO35451 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Atf6bO35451 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC16.99■□□□□ 0.31
Atf6bO35451 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6bO35451 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6bO35451 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Atf6bO35451 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC16.98■□□□□ 0.31
Atf6bO35451 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC16.98■□□□□ 0.31
Atf6bO35451 Gm45417-201ENSMUST00000209533 758 ntBASIC16.98■□□□□ 0.31
Atf6bO35451 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6bO35451 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6bO35451 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6bO35451 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6bO35451 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6bO35451 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Atf6bO35451 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6bO35451 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6bO35451 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6bO35451 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6bO35451 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Atf6bO35451 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6bO35451 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6bO35451 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6bO35451 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC16.97■□□□□ 0.31
Atf6bO35451 Mir6236-201ENSMUST00000184437 123 ntBASIC16.97■□□□□ 0.31
Atf6bO35451 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC16.97■□□□□ 0.31
Atf6bO35451 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6bO35451 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6bO35451 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6bO35451 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6bO35451 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Atf6bO35451 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
Atf6bO35451 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Atf6bO35451 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Atf6bO35451 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atf6bO35451 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.96■□□□□ 0.31
Atf6bO35451 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Atf6bO35451 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
Atf6bO35451 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atf6bO35451 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atf6bO35451 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
Atf6bO35451 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
Atf6bO35451 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.3
Atf6bO35451 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
Atf6bO35451 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC16.95■□□□□ 0.3
Atf6bO35451 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6bO35451 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6bO35451 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
Atf6bO35451 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms