Protein–RNA interactions for Protein: O35350

Capn1, Calpain-1 catalytic subunit, mousemouse

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Capn1O35350 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Capn1O35350 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Capn1O35350 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Capn1O35350 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC18.16■□□□□ 0.5
Capn1O35350 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC18.16■□□□□ 0.5
Capn1O35350 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
Capn1O35350 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Capn1O35350 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
Capn1O35350 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Capn1O35350 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Capn1O35350 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC18.15■□□□□ 0.5
Capn1O35350 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Capn1O35350 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Capn1O35350 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Capn1O35350 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.15■□□□□ 0.5
Capn1O35350 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Capn1O35350 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC18.15■□□□□ 0.5
Capn1O35350 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Capn1O35350 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Capn1O35350 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.14■□□□□ 0.49
Capn1O35350 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Capn1O35350 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Capn1O35350 Cdc34b-202ENSMUST00000188741 1252 ntBASIC18.14■□□□□ 0.49
Capn1O35350 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Capn1O35350 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
Capn1O35350 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC18.14■□□□□ 0.49
Capn1O35350 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Capn1O35350 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Capn1O35350 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Capn1O35350 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Capn1O35350 Dgcr6-209ENSMUST00000155387 1415 ntTSL 3 BASIC18.14■□□□□ 0.49
Capn1O35350 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Capn1O35350 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Capn1O35350 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Capn1O35350 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Capn1O35350 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Capn1O35350 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Capn1O35350 Gm26833-201ENSMUST00000180899 440 ntBASIC18.13■□□□□ 0.49
Capn1O35350 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC18.13■□□□□ 0.49
Capn1O35350 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Capn1O35350 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
Capn1O35350 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Capn1O35350 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Capn1O35350 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Capn1O35350 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Capn1O35350 Iqck-206ENSMUST00000208658 2891 ntBASIC18.12■□□□□ 0.49
Capn1O35350 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.12■□□□□ 0.49
Capn1O35350 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.12■□□□□ 0.49
Capn1O35350 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Capn1O35350 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Capn1O35350 Gm5874-201ENSMUST00000096101 508 ntBASIC18.12■□□□□ 0.49
Capn1O35350 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Capn1O35350 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Capn1O35350 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Capn1O35350 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC18.11■□□□□ 0.49
Capn1O35350 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Capn1O35350 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Capn1O35350 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Capn1O35350 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Capn1O35350 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Capn1O35350 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Capn1O35350 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Capn1O35350 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Capn1O35350 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Capn1O35350 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Capn1O35350 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Capn1O35350 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Capn1O35350 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC18.1■□□□□ 0.49
Capn1O35350 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC18.1■□□□□ 0.49
Capn1O35350 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Capn1O35350 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Capn1O35350 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC18.1■□□□□ 0.49
Capn1O35350 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Capn1O35350 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Capn1O35350 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Capn1O35350 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Capn1O35350 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Capn1O35350 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Capn1O35350 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Capn1O35350 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.09■□□□□ 0.49
Capn1O35350 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.08■□□□□ 0.49
Capn1O35350 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Capn1O35350 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Capn1O35350 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Capn1O35350 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC18.08■□□□□ 0.48
Capn1O35350 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Capn1O35350 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
Capn1O35350 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Capn1O35350 Gm10209-201ENSMUST00000203397 1607 ntBASIC18.08■□□□□ 0.48
Capn1O35350 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Capn1O35350 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Capn1O35350 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Capn1O35350 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Capn1O35350 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Capn1O35350 Ankrd13d-201ENSMUST00000056888 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Capn1O35350 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Capn1O35350 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Capn1O35350 Gm43060-201ENSMUST00000200621 289 ntBASIC18.07■□□□□ 0.48
Capn1O35350 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC18.07■□□□□ 0.48
Capn1O35350 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms