Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Bhlhe40O35185 Ttc39c-201ENSMUST00000025294 2571 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Bhlhe40O35185 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Bhlhe40O35185 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC19.45■□□□□ 0.7
Bhlhe40O35185 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC19.45■□□□□ 0.7
Bhlhe40O35185 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC19.45■□□□□ 0.7
Bhlhe40O35185 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
Bhlhe40O35185 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Bhlhe40O35185 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Bhlhe40O35185 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Bhlhe40O35185 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Bhlhe40O35185 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Bhlhe40O35185 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Bhlhe40O35185 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Bhlhe40O35185 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
Bhlhe40O35185 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Bhlhe40O35185 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
Bhlhe40O35185 Gm13042-201ENSMUST00000119244 1955 ntBASIC19.44■□□□□ 0.7
Bhlhe40O35185 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Bhlhe40O35185 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC19.44■□□□□ 0.7
Bhlhe40O35185 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Bhlhe40O35185 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Bhlhe40O35185 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Bhlhe40O35185 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
Bhlhe40O35185 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Bhlhe40O35185 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.43■□□□□ 0.7
Bhlhe40O35185 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Bhlhe40O35185 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Bhlhe40O35185 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Bhlhe40O35185 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC19.43■□□□□ 0.7
Bhlhe40O35185 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Bhlhe40O35185 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Bhlhe40O35185 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Bhlhe40O35185 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Bhlhe40O35185 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Bhlhe40O35185 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Bhlhe40O35185 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Bhlhe40O35185 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Bhlhe40O35185 Gm42569-201ENSMUST00000200539 472 ntBASIC19.42■□□□□ 0.7
Bhlhe40O35185 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Bhlhe40O35185 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Bhlhe40O35185 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Bhlhe40O35185 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Bhlhe40O35185 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Bhlhe40O35185 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Bhlhe40O35185 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Bhlhe40O35185 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Bhlhe40O35185 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC19.41■□□□□ 0.7
Bhlhe40O35185 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bhlhe40O35185 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bhlhe40O35185 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.4■□□□□ 0.7
Bhlhe40O35185 Gm10849-201ENSMUST00000100397 618 ntBASIC19.4■□□□□ 0.7
Bhlhe40O35185 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.4■□□□□ 0.7
Bhlhe40O35185 Gm7291-201ENSMUST00000199147 382 ntBASIC19.4■□□□□ 0.7
Bhlhe40O35185 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bhlhe40O35185 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bhlhe40O35185 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bhlhe40O35185 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Bhlhe40O35185 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Bhlhe40O35185 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
Bhlhe40O35185 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Bhlhe40O35185 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Bhlhe40O35185 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Bhlhe40O35185 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Bhlhe40O35185 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Bhlhe40O35185 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Bhlhe40O35185 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Bhlhe40O35185 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Bhlhe40O35185 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Bhlhe40O35185 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Bhlhe40O35185 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC19.38■□□□□ 0.69
Bhlhe40O35185 Gm36033-202ENSMUST00000214827 745 ntTSL 2 BASIC19.38■□□□□ 0.69
Bhlhe40O35185 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Bhlhe40O35185 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Bhlhe40O35185 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Bhlhe40O35185 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC19.37■□□□□ 0.69
Bhlhe40O35185 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC19.37■□□□□ 0.69
Bhlhe40O35185 Gm10033-202ENSMUST00000211874 928 ntBASIC19.37■□□□□ 0.69
Bhlhe40O35185 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Bhlhe40O35185 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Bhlhe40O35185 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Bhlhe40O35185 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Bhlhe40O35185 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Bhlhe40O35185 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Bhlhe40O35185 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Bhlhe40O35185 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Bhlhe40O35185 Gm37035-201ENSMUST00000194809 2148 ntBASIC19.36■□□□□ 0.69
Bhlhe40O35185 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Bhlhe40O35185 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Bhlhe40O35185 Stum-202ENSMUST00000179826 601 ntAPPRIS ALT1 TSL 5 BASIC19.36■□□□□ 0.69
Bhlhe40O35185 Gm27405-201ENSMUST00000184201 112 ntBASIC19.36■□□□□ 0.69
Bhlhe40O35185 Gm29257-201ENSMUST00000186115 639 ntBASIC19.36■□□□□ 0.69
Bhlhe40O35185 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Bhlhe40O35185 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Bhlhe40O35185 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Bhlhe40O35185 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Bhlhe40O35185 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Bhlhe40O35185 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Bhlhe40O35185 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Bhlhe40O35185 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms