Protein–RNA interactions for Protein: O35126

Atn1, Atrophin-1, mousemouse

Predictions only

Length 1,175 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atn1O35126 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Atn1O35126 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Atn1O35126 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
Atn1O35126 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Atn1O35126 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atn1O35126 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Atn1O35126 Fgfrl1-201ENSMUST00000013633 2329 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atn1O35126 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atn1O35126 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Atn1O35126 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.24■□□□□ 0.67
Atn1O35126 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Atn1O35126 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.24■□□□□ 0.67
Atn1O35126 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.24■□□□□ 0.67
Atn1O35126 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atn1O35126 Gm5812-201ENSMUST00000061073 957 ntBASIC19.24■□□□□ 0.67
Atn1O35126 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atn1O35126 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Atn1O35126 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atn1O35126 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Atn1O35126 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atn1O35126 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Atn1O35126 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC19.23■□□□□ 0.67
Atn1O35126 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atn1O35126 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atn1O35126 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atn1O35126 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atn1O35126 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atn1O35126 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Atn1O35126 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atn1O35126 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC19.23■□□□□ 0.67
Atn1O35126 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Atn1O35126 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atn1O35126 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Atn1O35126 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC19.22■□□□□ 0.67
Atn1O35126 Rp2-203ENSMUST00000115391 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atn1O35126 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atn1O35126 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atn1O35126 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atn1O35126 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atn1O35126 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Atn1O35126 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.22■□□□□ 0.67
Atn1O35126 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atn1O35126 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atn1O35126 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atn1O35126 Gm43530-201ENSMUST00000195920 274 ntBASIC19.21■□□□□ 0.67
Atn1O35126 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Atn1O35126 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Atn1O35126 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atn1O35126 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Atn1O35126 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atn1O35126 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.2■□□□□ 0.66
Atn1O35126 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Atn1O35126 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atn1O35126 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atn1O35126 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.2■□□□□ 0.66
Atn1O35126 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Atn1O35126 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Atn1O35126 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
Atn1O35126 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.2■□□□□ 0.66
Atn1O35126 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atn1O35126 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atn1O35126 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atn1O35126 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atn1O35126 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC19.19■□□□□ 0.66
Atn1O35126 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atn1O35126 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atn1O35126 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atn1O35126 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Atn1O35126 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Atn1O35126 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC19.19■□□□□ 0.66
Atn1O35126 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Atn1O35126 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Atn1O35126 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Atn1O35126 Mir6236-201ENSMUST00000184437 123 ntBASIC19.18■□□□□ 0.66
Atn1O35126 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atn1O35126 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Atn1O35126 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.18■□□□□ 0.66
Atn1O35126 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atn1O35126 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atn1O35126 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atn1O35126 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atn1O35126 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Atn1O35126 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.17■□□□□ 0.66
Atn1O35126 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Atn1O35126 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC19.17■□□□□ 0.66
Atn1O35126 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.17■□□□□ 0.66
Atn1O35126 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atn1O35126 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Atn1O35126 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Atn1O35126 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atn1O35126 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atn1O35126 Gm15546-201ENSMUST00000122095 826 ntBASIC19.16■□□□□ 0.66
Atn1O35126 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atn1O35126 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atn1O35126 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Atn1O35126 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Atn1O35126 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC19.15■□□□□ 0.66
Atn1O35126 Gm20100-201ENSMUST00000209418 2272 ntBASIC19.15■□□□□ 0.66
Atn1O35126 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.15■□□□□ 0.66
Atn1O35126 Gm7417-201ENSMUST00000192950 473 ntBASIC19.15■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 61.1 ms