Protein–RNA interactions for Protein: O35118

Gfra3, GDNF family receptor alpha-3, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gfra3O35118 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC17.04■□□□□ 0.32
Gfra3O35118 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gfra3O35118 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gfra3O35118 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gfra3O35118 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gfra3O35118 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gfra3O35118 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Gfra3O35118 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gfra3O35118 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Gfra3O35118 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Gfra3O35118 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Gfra3O35118 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gfra3O35118 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gfra3O35118 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gfra3O35118 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Gfra3O35118 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gfra3O35118 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gfra3O35118 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Gfra3O35118 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Gfra3O35118 Prkab1-201ENSMUST00000031486 2089 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gfra3O35118 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gfra3O35118 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gfra3O35118 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Gfra3O35118 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gfra3O35118 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Gfra3O35118 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gfra3O35118 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Gfra3O35118 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gfra3O35118 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.02■□□□□ 0.32
Gfra3O35118 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gfra3O35118 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.02■□□□□ 0.32
Gfra3O35118 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gfra3O35118 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.02■□□□□ 0.32
Gfra3O35118 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Gfra3O35118 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Gfra3O35118 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gfra3O35118 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.31
Gfra3O35118 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gfra3O35118 Bcl10-201ENSMUST00000029842 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gfra3O35118 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Gfra3O35118 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gfra3O35118 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gfra3O35118 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gfra3O35118 Gm43060-201ENSMUST00000200621 289 ntBASIC17.01■□□□□ 0.31
Gfra3O35118 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Gfra3O35118 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Gfra3O35118 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Gfra3O35118 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gfra3O35118 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gfra3O35118 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Gfra3O35118 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Gfra3O35118 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
Gfra3O35118 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Gfra3O35118 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Gfra3O35118 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gfra3O35118 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC16.99■□□□□ 0.31
Gfra3O35118 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
Gfra3O35118 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Gfra3O35118 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Gfra3O35118 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
Gfra3O35118 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.99■□□□□ 0.31
Gfra3O35118 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gfra3O35118 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gfra3O35118 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gfra3O35118 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gfra3O35118 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Gfra3O35118 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gfra3O35118 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
Gfra3O35118 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC16.99■□□□□ 0.31
Gfra3O35118 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Gfra3O35118 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
Gfra3O35118 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.99■□□□□ 0.31
Gfra3O35118 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gfra3O35118 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gfra3O35118 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gfra3O35118 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Gfra3O35118 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Gfra3O35118 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
Gfra3O35118 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gfra3O35118 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gfra3O35118 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gfra3O35118 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Gfra3O35118 Gm11421-201ENSMUST00000122124 294 ntBASIC16.97■□□□□ 0.31
Gfra3O35118 Gm18284-201ENSMUST00000172604 624 ntBASIC16.97■□□□□ 0.31
Gfra3O35118 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Gfra3O35118 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gfra3O35118 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gfra3O35118 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gfra3O35118 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gfra3O35118 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Gfra3O35118 Art5-201ENSMUST00000094128 1518 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
Gfra3O35118 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
Gfra3O35118 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Gfra3O35118 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gfra3O35118 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Gfra3O35118 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gfra3O35118 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
Gfra3O35118 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
Gfra3O35118 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
Gfra3O35118 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 16.1 ms