Protein–RNA interactions for Protein: O08547

Sec22b, Vesicle-trafficking protein SEC22b, mousemouse

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec22bO08547 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sec22bO08547 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sec22bO08547 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Sec22bO08547 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.49■□□□□ 0.71
Sec22bO08547 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sec22bO08547 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sec22bO08547 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
Sec22bO08547 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
Sec22bO08547 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
Sec22bO08547 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
Sec22bO08547 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC19.48■□□□□ 0.71
Sec22bO08547 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sec22bO08547 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sec22bO08547 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC19.48■□□□□ 0.71
Sec22bO08547 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.48■□□□□ 0.71
Sec22bO08547 Golph3-202ENSMUST00000226517 2359 ntBASIC19.48■□□□□ 0.71
Sec22bO08547 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
Sec22bO08547 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC19.48■□□□□ 0.71
Sec22bO08547 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Sec22bO08547 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Sec22bO08547 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Sec22bO08547 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Sec22bO08547 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sec22bO08547 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC19.47■□□□□ 0.71
Sec22bO08547 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC19.47■□□□□ 0.71
Sec22bO08547 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sec22bO08547 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Sec22bO08547 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Sec22bO08547 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Sec22bO08547 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
Sec22bO08547 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Sec22bO08547 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sec22bO08547 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC19.46■□□□□ 0.71
Sec22bO08547 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC19.46■□□□□ 0.71
Sec22bO08547 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sec22bO08547 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
Sec22bO08547 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Sec22bO08547 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Sec22bO08547 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sec22bO08547 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC19.45■□□□□ 0.7
Sec22bO08547 8430432A02Rik-201ENSMUST00000039080 1248 ntBASIC19.45■□□□□ 0.7
Sec22bO08547 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sec22bO08547 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sec22bO08547 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Sec22bO08547 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sec22bO08547 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sec22bO08547 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sec22bO08547 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sec22bO08547 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sec22bO08547 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Sec22bO08547 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.44■□□□□ 0.7
Sec22bO08547 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
Sec22bO08547 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Sec22bO08547 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sec22bO08547 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Sec22bO08547 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sec22bO08547 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sec22bO08547 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sec22bO08547 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.43■□□□□ 0.7
Sec22bO08547 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Sec22bO08547 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Sec22bO08547 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Sec22bO08547 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.43■□□□□ 0.7
Sec22bO08547 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sec22bO08547 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sec22bO08547 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Sec22bO08547 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sec22bO08547 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.42■□□□□ 0.7
Sec22bO08547 Krt8-ps-201ENSMUST00000208495 945 ntBASIC19.42■□□□□ 0.7
Sec22bO08547 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sec22bO08547 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sec22bO08547 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sec22bO08547 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sec22bO08547 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Sec22bO08547 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Sec22bO08547 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sec22bO08547 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sec22bO08547 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sec22bO08547 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sec22bO08547 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Sec22bO08547 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.42■□□□□ 0.7
Sec22bO08547 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sec22bO08547 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sec22bO08547 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC19.41■□□□□ 0.7
Sec22bO08547 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Sec22bO08547 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Sec22bO08547 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC19.41■□□□□ 0.7
Sec22bO08547 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.41■□□□□ 0.7
Sec22bO08547 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sec22bO08547 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sec22bO08547 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sec22bO08547 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Sec22bO08547 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sec22bO08547 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Sec22bO08547 D830036C21Rik-202ENSMUST00000208263 1548 ntBASIC19.4■□□□□ 0.7
Sec22bO08547 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Sec22bO08547 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.4■□□□□ 0.7
Sec22bO08547 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Sec22bO08547 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Sec22bO08547 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.39■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms