Protein–RNA interactions for Protein: J3QPF1

Gm10553, Predicted gene 10553, mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm10553J3QPF1 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Gm10553J3QPF1 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC15.07■□□□□ 0
Gm10553J3QPF1 Gm43006-201ENSMUST00000197702 1602 ntBASIC15.07■□□□□ 0
Gm10553J3QPF1 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC15.07■□□□□ 0
Gm10553J3QPF1 Gm43017-201ENSMUST00000198296 752 ntBASIC15.07■□□□□ 0
Gm10553J3QPF1 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC15.07■□□□□ 0
Gm10553J3QPF1 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm10553J3QPF1 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm10553J3QPF1 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC15.07■□□□□ 0
Gm10553J3QPF1 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC15.07■□□□□ 0
Gm10553J3QPF1 Hoxd4-202ENSMUST00000111980 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm10553J3QPF1 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm10553J3QPF1 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm10553J3QPF1 Pla2g12a-201ENSMUST00000029629 1561 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Gm10553J3QPF1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm10553J3QPF1 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.06■□□□□ 0
Gm10553J3QPF1 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm10553J3QPF1 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Gm10553J3QPF1 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm10553J3QPF1 Flvcr1-202ENSMUST00000191946 1216 ntBASIC15.06■□□□□ 0
Gm10553J3QPF1 4930519A11Rik-202ENSMUST00000221053 667 ntTSL 3 BASIC15.06■□□□□ 0
Gm10553J3QPF1 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm10553J3QPF1 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm10553J3QPF1 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC15.06■□□□□ 0
Gm10553J3QPF1 Exoc3l2-201ENSMUST00000011407 2200 ntTSL 5 BASIC15.06■□□□□ 0
Gm10553J3QPF1 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm10553J3QPF1 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm10553J3QPF1 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Gm10553J3QPF1 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC15.06■□□□□ 0
Gm10553J3QPF1 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Gm10553J3QPF1 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Gm10553J3QPF1 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
Gm10553J3QPF1 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Gm10553J3QPF1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC15.05■□□□□ 0
Gm10553J3QPF1 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm10553J3QPF1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm10553J3QPF1 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Gm10553J3QPF1 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm10553J3QPF1 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.05■□□□□ -0
Gm10553J3QPF1 Serp2-204ENSMUST00000228055 705 ntBASIC15.05■□□□□ -0
Gm10553J3QPF1 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm10553J3QPF1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Gm10553J3QPF1 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.05■□□□□ -0
Gm10553J3QPF1 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC15.05■□□□□ -0
Gm10553J3QPF1 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm10553J3QPF1 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm10553J3QPF1 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Gm10553J3QPF1 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm10553J3QPF1 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC15.04■□□□□ -0
Gm10553J3QPF1 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC15.04■□□□□ -0
Gm10553J3QPF1 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC15.04■□□□□ -0
Gm10553J3QPF1 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm10553J3QPF1 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Gm10553J3QPF1 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm10553J3QPF1 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC15.04■□□□□ -0
Gm10553J3QPF1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC15.04■□□□□ -0
Gm10553J3QPF1 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC15.04■□□□□ -0
Gm10553J3QPF1 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC15.04■□□□□ -0
Gm10553J3QPF1 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm10553J3QPF1 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm10553J3QPF1 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC15.04■□□□□ -0
Gm10553J3QPF1 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Gm10553J3QPF1 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
Gm10553J3QPF1 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC15.03■□□□□ -0
Gm10553J3QPF1 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm10553J3QPF1 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm10553J3QPF1 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.03■□□□□ -0
Gm10553J3QPF1 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm10553J3QPF1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC15.03■□□□□ -0
Gm10553J3QPF1 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC15.03■□□□□ -0
Gm10553J3QPF1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Gm10553J3QPF1 Gm43173-201ENSMUST00000202246 593 ntBASIC15.03■□□□□ -0
Gm10553J3QPF1 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Gm10553J3QPF1 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC15.03■□□□□ -0
Gm10553J3QPF1 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC15.03■□□□□ -0
Gm10553J3QPF1 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Gm10553J3QPF1 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Gm10553J3QPF1 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Gm10553J3QPF1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Gm10553J3QPF1 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Gm10553J3QPF1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC15.03■□□□□ -0
Gm10553J3QPF1 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Gm10553J3QPF1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC15.03■□□□□ -0
Gm10553J3QPF1 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm10553J3QPF1 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm10553J3QPF1 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Gm10553J3QPF1 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Gm10553J3QPF1 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Gm10553J3QPF1 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC15.02■□□□□ -0
Gm10553J3QPF1 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
Gm10553J3QPF1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm10553J3QPF1 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Gm10553J3QPF1 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm10553J3QPF1 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm10553J3QPF1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm10553J3QPF1 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm10553J3QPF1 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm10553J3QPF1 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Gm10553J3QPF1 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Gm10553J3QPF1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 19.9 ms