Protein–RNA interactions for Protein: J3QP07

B020004C17Rik, RIKEN cDNA B020004C17 gene, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
B020004C17RikJ3QP07 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
B020004C17RikJ3QP07 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
B020004C17RikJ3QP07 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC22.32■■□□□ 1.16
B020004C17RikJ3QP07 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
B020004C17RikJ3QP07 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
B020004C17RikJ3QP07 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
B020004C17RikJ3QP07 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
B020004C17RikJ3QP07 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
B020004C17RikJ3QP07 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
B020004C17RikJ3QP07 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
B020004C17RikJ3QP07 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
B020004C17RikJ3QP07 CT010467.1-202ENSMUST00000205406 714 ntBASIC22.31■■□□□ 1.16
B020004C17RikJ3QP07 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC22.31■■□□□ 1.16
B020004C17RikJ3QP07 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
B020004C17RikJ3QP07 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC22.31■■□□□ 1.16
B020004C17RikJ3QP07 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC22.3■■□□□ 1.16
B020004C17RikJ3QP07 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
B020004C17RikJ3QP07 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
B020004C17RikJ3QP07 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
B020004C17RikJ3QP07 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
B020004C17RikJ3QP07 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
B020004C17RikJ3QP07 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
B020004C17RikJ3QP07 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
B020004C17RikJ3QP07 Rem2-202ENSMUST00000164766 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
B020004C17RikJ3QP07 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
B020004C17RikJ3QP07 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
B020004C17RikJ3QP07 Gm13148-201ENSMUST00000118892 745 ntBASIC22.29■■□□□ 1.16
B020004C17RikJ3QP07 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
B020004C17RikJ3QP07 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
B020004C17RikJ3QP07 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
B020004C17RikJ3QP07 Gm12527-201ENSMUST00000117967 564 ntBASIC22.28■■□□□ 1.16
B020004C17RikJ3QP07 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC22.28■■□□□ 1.16
B020004C17RikJ3QP07 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
B020004C17RikJ3QP07 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
B020004C17RikJ3QP07 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC22.28■■□□□ 1.16
B020004C17RikJ3QP07 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
B020004C17RikJ3QP07 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
B020004C17RikJ3QP07 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC22.27■■□□□ 1.16
B020004C17RikJ3QP07 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
B020004C17RikJ3QP07 Rhov-201ENSMUST00000037360 1703 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
B020004C17RikJ3QP07 Gm6365-201ENSMUST00000054711 744 ntBASIC22.27■■□□□ 1.16
B020004C17RikJ3QP07 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
B020004C17RikJ3QP07 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
B020004C17RikJ3QP07 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC22.26■■□□□ 1.15
B020004C17RikJ3QP07 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC22.26■■□□□ 1.15
B020004C17RikJ3QP07 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
B020004C17RikJ3QP07 Trip10-207ENSMUST00000224947 2016 ntAPPRIS P2 BASIC22.26■■□□□ 1.15
B020004C17RikJ3QP07 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
B020004C17RikJ3QP07 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC22.26■■□□□ 1.15
B020004C17RikJ3QP07 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
B020004C17RikJ3QP07 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
B020004C17RikJ3QP07 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC22.25■■□□□ 1.15
B020004C17RikJ3QP07 Gm22240-201ENSMUST00000175225 82 ntBASIC22.25■■□□□ 1.15
B020004C17RikJ3QP07 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
B020004C17RikJ3QP07 Gm38205-201ENSMUST00000192243 258 ntBASIC22.25■■□□□ 1.15
B020004C17RikJ3QP07 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
B020004C17RikJ3QP07 Cnp-201ENSMUST00000103120 2357 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
B020004C17RikJ3QP07 Gm10655-201ENSMUST00000098658 1397 ntBASIC22.25■■□□□ 1.15
B020004C17RikJ3QP07 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC22.24■■□□□ 1.15
B020004C17RikJ3QP07 Gm42911-201ENSMUST00000199360 1630 ntBASIC22.24■■□□□ 1.15
B020004C17RikJ3QP07 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
B020004C17RikJ3QP07 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
B020004C17RikJ3QP07 Gm13534-201ENSMUST00000121169 513 ntBASIC22.24■■□□□ 1.15
B020004C17RikJ3QP07 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
B020004C17RikJ3QP07 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
B020004C17RikJ3QP07 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
B020004C17RikJ3QP07 Gm26766-202ENSMUST00000227544 2347 ntBASIC22.24■■□□□ 1.15
B020004C17RikJ3QP07 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC22.23■■□□□ 1.15
B020004C17RikJ3QP07 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
B020004C17RikJ3QP07 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
B020004C17RikJ3QP07 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
B020004C17RikJ3QP07 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
B020004C17RikJ3QP07 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
B020004C17RikJ3QP07 Gm8520-201ENSMUST00000186517 868 ntBASIC22.23■■□□□ 1.15
B020004C17RikJ3QP07 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC22.23■■□□□ 1.15
B020004C17RikJ3QP07 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
B020004C17RikJ3QP07 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
B020004C17RikJ3QP07 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
B020004C17RikJ3QP07 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
B020004C17RikJ3QP07 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
B020004C17RikJ3QP07 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
B020004C17RikJ3QP07 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
B020004C17RikJ3QP07 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
B020004C17RikJ3QP07 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC22.22■■□□□ 1.15
B020004C17RikJ3QP07 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
B020004C17RikJ3QP07 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC22.22■■□□□ 1.15
B020004C17RikJ3QP07 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
B020004C17RikJ3QP07 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
B020004C17RikJ3QP07 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.21■■□□□ 1.15
B020004C17RikJ3QP07 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
B020004C17RikJ3QP07 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC22.21■■□□□ 1.15
B020004C17RikJ3QP07 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC22.21■■□□□ 1.15
B020004C17RikJ3QP07 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
B020004C17RikJ3QP07 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
B020004C17RikJ3QP07 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC22.2■■□□□ 1.15
B020004C17RikJ3QP07 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
B020004C17RikJ3QP07 Fbxw2-202ENSMUST00000091020 1838 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
B020004C17RikJ3QP07 Gm6420-201ENSMUST00000193885 723 ntBASIC22.2■■□□□ 1.14
B020004C17RikJ3QP07 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
B020004C17RikJ3QP07 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms