Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc188F6WEU2 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc188F6WEU2 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Ccdc188F6WEU2 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Ccdc188F6WEU2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Ccdc188F6WEU2 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc188F6WEU2 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc188F6WEU2 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc188F6WEU2 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc188F6WEU2 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Ccdc188F6WEU2 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc188F6WEU2 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Ccdc188F6WEU2 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC20.31■□□□□ 0.84
Ccdc188F6WEU2 Gm10231-201ENSMUST00000181584 441 ntBASIC20.31■□□□□ 0.84
Ccdc188F6WEU2 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc188F6WEU2 Gm10175-202ENSMUST00000208752 441 ntBASIC20.31■□□□□ 0.84
Ccdc188F6WEU2 AC153881.1-201ENSMUST00000214448 284 ntBASIC20.31■□□□□ 0.84
Ccdc188F6WEU2 AC154649.1-201ENSMUST00000227392 384 ntBASIC20.31■□□□□ 0.84
Ccdc188F6WEU2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc188F6WEU2 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc188F6WEU2 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.31■□□□□ 0.84
Ccdc188F6WEU2 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc188F6WEU2 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Ccdc188F6WEU2 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc188F6WEU2 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc188F6WEU2 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc188F6WEU2 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc188F6WEU2 Gm7367-201ENSMUST00000057611 492 ntBASIC20.3■□□□□ 0.84
Ccdc188F6WEU2 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Ccdc188F6WEU2 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Ccdc188F6WEU2 Hoxa2-201ENSMUST00000014848 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc188F6WEU2 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc188F6WEU2 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
Ccdc188F6WEU2 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC20.29■□□□□ 0.84
Ccdc188F6WEU2 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
Ccdc188F6WEU2 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC20.29■□□□□ 0.84
Ccdc188F6WEU2 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc188F6WEU2 CT030146.1-201ENSMUST00000220919 217 ntBASIC20.29■□□□□ 0.84
Ccdc188F6WEU2 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc188F6WEU2 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Ccdc188F6WEU2 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.28■□□□□ 0.84
Ccdc188F6WEU2 Gm20472-201ENSMUST00000174403 1240 ntBASIC20.28■□□□□ 0.84
Ccdc188F6WEU2 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ccdc188F6WEU2 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Ccdc188F6WEU2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc188F6WEU2 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc188F6WEU2 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc188F6WEU2 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc188F6WEU2 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.27■□□□□ 0.84
Ccdc188F6WEU2 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc188F6WEU2 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc188F6WEU2 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc188F6WEU2 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Ccdc188F6WEU2 Gpatch3-201ENSMUST00000030662 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ccdc188F6WEU2 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ccdc188F6WEU2 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc188F6WEU2 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Ccdc188F6WEU2 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc188F6WEU2 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc188F6WEU2 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc188F6WEU2 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc188F6WEU2 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.26■□□□□ 0.83
Ccdc188F6WEU2 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ccdc188F6WEU2 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc188F6WEU2 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc188F6WEU2 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc188F6WEU2 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc188F6WEU2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC20.25■□□□□ 0.83
Ccdc188F6WEU2 Gm13534-201ENSMUST00000121169 513 ntBASIC20.25■□□□□ 0.83
Ccdc188F6WEU2 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC20.25■□□□□ 0.83
Ccdc188F6WEU2 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc188F6WEU2 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.25■□□□□ 0.83
Ccdc188F6WEU2 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc188F6WEU2 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc188F6WEU2 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC20.25■□□□□ 0.83
Ccdc188F6WEU2 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Ccdc188F6WEU2 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ccdc188F6WEU2 Tcp11-203ENSMUST00000114836 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc188F6WEU2 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc188F6WEU2 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc188F6WEU2 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc188F6WEU2 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc188F6WEU2 Gm37563-201ENSMUST00000192580 1513 ntBASIC20.24■□□□□ 0.83
Ccdc188F6WEU2 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
Ccdc188F6WEU2 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc188F6WEU2 Gm10698-201ENSMUST00000182663 604 ntBASIC20.24■□□□□ 0.83
Ccdc188F6WEU2 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc188F6WEU2 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.24■□□□□ 0.83
Ccdc188F6WEU2 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ccdc188F6WEU2 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Ccdc188F6WEU2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC20.23■□□□□ 0.83
Ccdc188F6WEU2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC20.23■□□□□ 0.83
Ccdc188F6WEU2 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc188F6WEU2 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ccdc188F6WEU2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ccdc188F6WEU2 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc188F6WEU2 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc188F6WEU2 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.22■□□□□ 0.83
Ccdc188F6WEU2 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ccdc188F6WEU2 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms