Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Atf6F6VAN0 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.26■□□□□ 0.83
Atf6F6VAN0 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Atf6F6VAN0 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC20.26■□□□□ 0.83
Atf6F6VAN0 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atf6F6VAN0 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Atf6F6VAN0 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
Atf6F6VAN0 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
Atf6F6VAN0 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atf6F6VAN0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Atf6F6VAN0 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.25■□□□□ 0.83
Atf6F6VAN0 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Atf6F6VAN0 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Atf6F6VAN0 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atf6F6VAN0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Atf6F6VAN0 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atf6F6VAN0 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Atf6F6VAN0 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Atf6F6VAN0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Atf6F6VAN0 Sox12-202ENSMUST00000182625 4453 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
Atf6F6VAN0 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atf6F6VAN0 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atf6F6VAN0 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atf6F6VAN0 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atf6F6VAN0 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atf6F6VAN0 Gm27045-201ENSMUST00000182145 1402 ntBASIC20.24■□□□□ 0.83
Atf6F6VAN0 Gm6802-201ENSMUST00000167843 1983 ntBASIC20.24■□□□□ 0.83
Atf6F6VAN0 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.24■□□□□ 0.83
Atf6F6VAN0 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Atf6F6VAN0 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atf6F6VAN0 Golph3-202ENSMUST00000226517 2359 ntBASIC20.23■□□□□ 0.83
Atf6F6VAN0 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC20.23■□□□□ 0.83
Atf6F6VAN0 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC20.23■□□□□ 0.83
Atf6F6VAN0 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atf6F6VAN0 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Atf6F6VAN0 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC20.23■□□□□ 0.83
Atf6F6VAN0 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Atf6F6VAN0 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Atf6F6VAN0 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC20.23■□□□□ 0.83
Atf6F6VAN0 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atf6F6VAN0 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atf6F6VAN0 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atf6F6VAN0 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
Atf6F6VAN0 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Atf6F6VAN0 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC20.22■□□□□ 0.83
Atf6F6VAN0 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atf6F6VAN0 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Atf6F6VAN0 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atf6F6VAN0 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atf6F6VAN0 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Atf6F6VAN0 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atf6F6VAN0 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atf6F6VAN0 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Atf6F6VAN0 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.22■□□□□ 0.83
Atf6F6VAN0 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Atf6F6VAN0 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atf6F6VAN0 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atf6F6VAN0 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atf6F6VAN0 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atf6F6VAN0 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Atf6F6VAN0 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
Atf6F6VAN0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Atf6F6VAN0 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atf6F6VAN0 Gm9847-201ENSMUST00000052528 599 ntBASIC20.21■□□□□ 0.83
Atf6F6VAN0 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
Atf6F6VAN0 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atf6F6VAN0 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Atf6F6VAN0 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Atf6F6VAN0 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Atf6F6VAN0 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
Atf6F6VAN0 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Atf6F6VAN0 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atf6F6VAN0 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atf6F6VAN0 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.2■□□□□ 0.82
Atf6F6VAN0 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Atf6F6VAN0 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC20.2■□□□□ 0.82
Atf6F6VAN0 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atf6F6VAN0 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atf6F6VAN0 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Atf6F6VAN0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.2■□□□□ 0.82
Atf6F6VAN0 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Atf6F6VAN0 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC20.19■□□□□ 0.82
Atf6F6VAN0 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Atf6F6VAN0 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atf6F6VAN0 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC20.19■□□□□ 0.82
Atf6F6VAN0 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Atf6F6VAN0 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Atf6F6VAN0 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atf6F6VAN0 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atf6F6VAN0 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC20.18■□□□□ 0.82
Atf6F6VAN0 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atf6F6VAN0 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atf6F6VAN0 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atf6F6VAN0 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Atf6F6VAN0 Gm6085-201ENSMUST00000182774 1470 ntBASIC20.18■□□□□ 0.82
Atf6F6VAN0 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Atf6F6VAN0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf6F6VAN0 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf6F6VAN0 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Atf6F6VAN0 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms