Protein–RNA interactions for Protein: E9PY46

Ift140, Intraflagellar transport protein 140 homolog, mousemouse

Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ift140E9PY46 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Ift140E9PY46 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Ift140E9PY46 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Ift140E9PY46 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
Ift140E9PY46 Gm43403-201ENSMUST00000198011 1786 ntBASIC31.94■■■□□ 2.7
Ift140E9PY46 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC31.94■■■□□ 2.7
Ift140E9PY46 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
Ift140E9PY46 Gm27275-201ENSMUST00000184318 272 ntBASIC31.93■■■□□ 2.7
Ift140E9PY46 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
Ift140E9PY46 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC31.93■■■□□ 2.7
Ift140E9PY46 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC31.93■■■□□ 2.7
Ift140E9PY46 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC31.93■■■□□ 2.7
Ift140E9PY46 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC31.92■■■□□ 2.7
Ift140E9PY46 Rab3c-203ENSMUST00000224180 967 ntBASIC31.92■■■□□ 2.7
Ift140E9PY46 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
Ift140E9PY46 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC31.91■■■□□ 2.7
Ift140E9PY46 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Ift140E9PY46 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Ift140E9PY46 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
Ift140E9PY46 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
Ift140E9PY46 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Ift140E9PY46 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC31.9■■■□□ 2.7
Ift140E9PY46 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC31.9■■■□□ 2.7
Ift140E9PY46 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
Ift140E9PY46 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC31.89■■■□□ 2.7
Ift140E9PY46 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC31.89■■■□□ 2.7
Ift140E9PY46 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC31.89■■■□□ 2.7
Ift140E9PY46 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC31.89■■■□□ 2.7
Ift140E9PY46 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC31.89■■■□□ 2.7
Ift140E9PY46 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ift140E9PY46 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Ift140E9PY46 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC31.88■■■□□ 2.69
Ift140E9PY46 Gm44672-201ENSMUST00000206944 1098 ntBASIC31.88■■■□□ 2.69
Ift140E9PY46 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
Ift140E9PY46 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
Ift140E9PY46 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Ift140E9PY46 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC31.87■■■□□ 2.69
Ift140E9PY46 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Ift140E9PY46 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
Ift140E9PY46 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Ift140E9PY46 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Ift140E9PY46 Ntn5-202ENSMUST00000182750 1758 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
Ift140E9PY46 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
Ift140E9PY46 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Ift140E9PY46 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Ift140E9PY46 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC31.86■■■□□ 2.69
Ift140E9PY46 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC31.86■■■□□ 2.69
Ift140E9PY46 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Ift140E9PY46 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
Ift140E9PY46 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Ift140E9PY46 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
Ift140E9PY46 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
Ift140E9PY46 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Ift140E9PY46 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Ift140E9PY46 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
Ift140E9PY46 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Ift140E9PY46 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
Ift140E9PY46 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
Ift140E9PY46 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ift140E9PY46 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC31.84■■■□□ 2.69
Ift140E9PY46 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Ift140E9PY46 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
Ift140E9PY46 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC31.84■■■□□ 2.69
Ift140E9PY46 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ift140E9PY46 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Ift140E9PY46 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Ift140E9PY46 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC31.83■■■□□ 2.69
Ift140E9PY46 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Ift140E9PY46 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC31.82■■■□□ 2.69
Ift140E9PY46 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC31.82■■■□□ 2.68
Ift140E9PY46 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Ift140E9PY46 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
Ift140E9PY46 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC31.81■■■□□ 2.68
Ift140E9PY46 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC31.81■■■□□ 2.68
Ift140E9PY46 Krtap5-1-202ENSMUST00000188274 742 ntBASIC31.81■■■□□ 2.68
Ift140E9PY46 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC31.81■■■□□ 2.68
Ift140E9PY46 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
Ift140E9PY46 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
Ift140E9PY46 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Ift140E9PY46 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
Ift140E9PY46 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
Ift140E9PY46 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC31.79■■■□□ 2.68
Ift140E9PY46 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
Ift140E9PY46 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Ift140E9PY46 Gm6576-201ENSMUST00000169678 883 ntBASIC31.78■■■□□ 2.68
Ift140E9PY46 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC31.78■■■□□ 2.68
Ift140E9PY46 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
Ift140E9PY46 Gm715-201ENSMUST00000117865 831 ntBASIC31.78■■■□□ 2.68
Ift140E9PY46 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC31.78■■■□□ 2.68
Ift140E9PY46 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Ift140E9PY46 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
Ift140E9PY46 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Ift140E9PY46 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
Ift140E9PY46 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Ift140E9PY46 Gm5643-201ENSMUST00000117081 966 ntBASIC31.76■■■□□ 2.67
Ift140E9PY46 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Ift140E9PY46 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ift140E9PY46 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
Ift140E9PY46 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
Ift140E9PY46 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms