Protein–RNA interactions for Protein: D3YY23

Lonrf1, LON peptidase N-terminal domain and RING finger protein 1, mousemouse

Predictions only

Length 762 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lonrf1D3YY23 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Lonrf1D3YY23 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lonrf1D3YY23 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC20.35■□□□□ 0.85
Lonrf1D3YY23 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lonrf1D3YY23 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lonrf1D3YY23 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lonrf1D3YY23 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Lonrf1D3YY23 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lonrf1D3YY23 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lonrf1D3YY23 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Lonrf1D3YY23 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC20.35■□□□□ 0.85
Lonrf1D3YY23 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Lonrf1D3YY23 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lonrf1D3YY23 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lonrf1D3YY23 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lonrf1D3YY23 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.34■□□□□ 0.85
Lonrf1D3YY23 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lonrf1D3YY23 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lonrf1D3YY23 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lonrf1D3YY23 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Lonrf1D3YY23 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Lonrf1D3YY23 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lonrf1D3YY23 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC20.33■□□□□ 0.85
Lonrf1D3YY23 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Lonrf1D3YY23 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC20.33■□□□□ 0.84
Lonrf1D3YY23 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Lonrf1D3YY23 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.32■□□□□ 0.84
Lonrf1D3YY23 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC20.32■□□□□ 0.84
Lonrf1D3YY23 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lonrf1D3YY23 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lonrf1D3YY23 Lig3-204ENSMUST00000131537 1782 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lonrf1D3YY23 Lig3-209ENSMUST00000173009 1785 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lonrf1D3YY23 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.32■□□□□ 0.84
Lonrf1D3YY23 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.32■□□□□ 0.84
Lonrf1D3YY23 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lonrf1D3YY23 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Lonrf1D3YY23 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.32■□□□□ 0.84
Lonrf1D3YY23 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Lonrf1D3YY23 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.32■□□□□ 0.84
Lonrf1D3YY23 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Lonrf1D3YY23 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lonrf1D3YY23 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lonrf1D3YY23 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Lonrf1D3YY23 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC20.31■□□□□ 0.84
Lonrf1D3YY23 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lonrf1D3YY23 Smim10l2a-201ENSMUST00000068106 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Lonrf1D3YY23 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC20.3■□□□□ 0.84
Lonrf1D3YY23 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lonrf1D3YY23 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lonrf1D3YY23 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lonrf1D3YY23 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.3■□□□□ 0.84
Lonrf1D3YY23 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lonrf1D3YY23 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Lonrf1D3YY23 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Lonrf1D3YY23 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
Lonrf1D3YY23 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lonrf1D3YY23 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lonrf1D3YY23 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lonrf1D3YY23 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lonrf1D3YY23 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lonrf1D3YY23 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC20.29■□□□□ 0.84
Lonrf1D3YY23 Gm9959-201ENSMUST00000068277 390 ntBASIC20.29■□□□□ 0.84
Lonrf1D3YY23 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lonrf1D3YY23 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Lonrf1D3YY23 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lonrf1D3YY23 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Lonrf1D3YY23 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lonrf1D3YY23 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Lonrf1D3YY23 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lonrf1D3YY23 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lonrf1D3YY23 Gm22238-201ENSMUST00000175222 88 ntBASIC20.28■□□□□ 0.84
Lonrf1D3YY23 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
Lonrf1D3YY23 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Lonrf1D3YY23 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.28■□□□□ 0.84
Lonrf1D3YY23 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.28■□□□□ 0.84
Lonrf1D3YY23 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Lonrf1D3YY23 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Lonrf1D3YY23 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.27■□□□□ 0.84
Lonrf1D3YY23 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.27■□□□□ 0.84
Lonrf1D3YY23 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lonrf1D3YY23 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lonrf1D3YY23 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lonrf1D3YY23 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lonrf1D3YY23 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lonrf1D3YY23 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Lonrf1D3YY23 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Lonrf1D3YY23 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.26■□□□□ 0.83
Lonrf1D3YY23 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.26■□□□□ 0.83
Lonrf1D3YY23 3110082J24Rik-202ENSMUST00000199573 767 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Lonrf1D3YY23 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lonrf1D3YY23 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Lonrf1D3YY23 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC20.26■□□□□ 0.83
Lonrf1D3YY23 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lonrf1D3YY23 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lonrf1D3YY23 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lonrf1D3YY23 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
Lonrf1D3YY23 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lonrf1D3YY23 Tomm40-201ENSMUST00000032555 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lonrf1D3YY23 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC20.25■□□□□ 0.83
Lonrf1D3YY23 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms