Protein–RNA interactions for Protein: A0N8R0

Trav12d-1, T cell receptor alpha variable 12D-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-1A0N8R0 Gm5921-201ENSMUST00000075898 882 ntBASIC15.87■□□□□ 0.13
Trav12d-1A0N8R0 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12d-1A0N8R0 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12d-1A0N8R0 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12d-1A0N8R0 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Trav12d-1A0N8R0 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-1A0N8R0 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-1A0N8R0 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-1A0N8R0 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-1A0N8R0 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-1A0N8R0 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC15.86■□□□□ 0.13
Trav12d-1A0N8R0 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-1A0N8R0 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-1A0N8R0 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-1A0N8R0 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-1A0N8R0 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC15.86■□□□□ 0.13
Trav12d-1A0N8R0 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-1A0N8R0 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Trav12d-1A0N8R0 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12d-1A0N8R0 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12d-1A0N8R0 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Trav12d-1A0N8R0 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12d-1A0N8R0 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12d-1A0N8R0 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12d-1A0N8R0 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12d-1A0N8R0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12d-1A0N8R0 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trav12d-1A0N8R0 A930012O16Rik-202ENSMUST00000156418 1541 ntTSL 2 BASIC15.84■□□□□ 0.13
Trav12d-1A0N8R0 Gm12524-201ENSMUST00000143109 1583 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav12d-1A0N8R0 Ccne1-201ENSMUST00000108023 2000 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav12d-1A0N8R0 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav12d-1A0N8R0 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav12d-1A0N8R0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav12d-1A0N8R0 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav12d-1A0N8R0 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trav12d-1A0N8R0 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trav12d-1A0N8R0 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Trav12d-1A0N8R0 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trav12d-1A0N8R0 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Trav12d-1A0N8R0 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC15.83■□□□□ 0.13
Trav12d-1A0N8R0 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
Trav12d-1A0N8R0 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC15.83■□□□□ 0.12
Trav12d-1A0N8R0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav12d-1A0N8R0 Map2k2-202ENSMUST00000105331 1556 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trav12d-1A0N8R0 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trav12d-1A0N8R0 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Trav12d-1A0N8R0 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12d-1A0N8R0 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12d-1A0N8R0 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12d-1A0N8R0 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12d-1A0N8R0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12d-1A0N8R0 Htr6-201ENSMUST00000068036 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12d-1A0N8R0 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12d-1A0N8R0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12d-1A0N8R0 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trav12d-1A0N8R0 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12d-1A0N8R0 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12d-1A0N8R0 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
Trav12d-1A0N8R0 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12d-1A0N8R0 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.81■□□□□ 0.12
Trav12d-1A0N8R0 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12d-1A0N8R0 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12d-1A0N8R0 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12d-1A0N8R0 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12d-1A0N8R0 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trav12d-1A0N8R0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC15.81■□□□□ 0.12
Trav12d-1A0N8R0 Gm40881-201ENSMUST00000223397 166 ntBASIC15.81■□□□□ 0.12
Trav12d-1A0N8R0 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC15.81■□□□□ 0.12
Trav12d-1A0N8R0 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trav12d-1A0N8R0 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav12d-1A0N8R0 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav12d-1A0N8R0 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav12d-1A0N8R0 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav12d-1A0N8R0 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav12d-1A0N8R0 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav12d-1A0N8R0 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav12d-1A0N8R0 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav12d-1A0N8R0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Trav12d-1A0N8R0 Gm43530-201ENSMUST00000195920 274 ntBASIC15.8■□□□□ 0.12
Trav12d-1A0N8R0 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC15.8■□□□□ 0.12
Trav12d-1A0N8R0 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trav12d-1A0N8R0 Hr-203ENSMUST00000161069 5607 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trav12d-1A0N8R0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12d-1A0N8R0 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12d-1A0N8R0 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12d-1A0N8R0 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12d-1A0N8R0 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12d-1A0N8R0 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trav12d-1A0N8R0 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12d-1A0N8R0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12d-1A0N8R0 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC15.79■□□□□ 0.12
Trav12d-1A0N8R0 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC15.79■□□□□ 0.12
Trav12d-1A0N8R0 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12d-1A0N8R0 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12d-1A0N8R0 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12d-1A0N8R0 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trav12d-1A0N8R0 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12d-1A0N8R0 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12d-1A0N8R0 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trav12d-1A0N8R0 Cap2-205ENSMUST00000225824 1634 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 19.3 ms