Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mindy4b-psA0A1W2P7H6 Gm26833-201ENSMUST00000180899 440 ntBASIC20.91■□□□□ 0.94
Mindy4b-psA0A1W2P7H6 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC20.91■□□□□ 0.94
Mindy4b-psA0A1W2P7H6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Mindy4b-psA0A1W2P7H6 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC20.91■□□□□ 0.94
Mindy4b-psA0A1W2P7H6 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mindy4b-psA0A1W2P7H6 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Mindy4b-psA0A1W2P7H6 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
Mindy4b-psA0A1W2P7H6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mindy4b-psA0A1W2P7H6 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mindy4b-psA0A1W2P7H6 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Mindy4b-psA0A1W2P7H6 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
Mindy4b-psA0A1W2P7H6 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mindy4b-psA0A1W2P7H6 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mindy4b-psA0A1W2P7H6 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mindy4b-psA0A1W2P7H6 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Mindy4b-psA0A1W2P7H6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Mindy4b-psA0A1W2P7H6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Mindy4b-psA0A1W2P7H6 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
Mindy4b-psA0A1W2P7H6 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.94
Mindy4b-psA0A1W2P7H6 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
Mindy4b-psA0A1W2P7H6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC20.89■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Rhoq-201ENSMUST00000024956 4151 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Stac3-201ENSMUST00000035839 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC20.89■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Sap18b-201ENSMUST00000074053 789 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Impa2-201ENSMUST00000025403 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC20.87■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.87■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Cdc34b-202ENSMUST00000188741 1252 ntBASIC20.86■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC20.86■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC20.86■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC20.86■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC20.85■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Gm11421-201ENSMUST00000122124 294 ntBASIC20.84■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC20.83■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Gm40848-201ENSMUST00000221998 324 ntBASIC20.83■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC20.83■□□□□ 0.93
Mindy4b-psA0A1W2P7H6 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Mindy4b-psA0A1W2P7H6 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Mindy4b-psA0A1W2P7H6 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Mindy4b-psA0A1W2P7H6 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Mindy4b-psA0A1W2P7H6 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Mindy4b-psA0A1W2P7H6 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC20.82■□□□□ 0.92
Mindy4b-psA0A1W2P7H6 Gm43909-201ENSMUST00000203443 1876 ntBASIC20.82■□□□□ 0.92
Mindy4b-psA0A1W2P7H6 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Mindy4b-psA0A1W2P7H6 Paip2-205ENSMUST00000115737 713 ntAPPRIS P1 TSL 3 BASIC20.82■□□□□ 0.92
Mindy4b-psA0A1W2P7H6 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC20.82■□□□□ 0.92
Mindy4b-psA0A1W2P7H6 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 12.4 ms