Protein–RNA interactions for Protein: A0A140LIT1

Ccdc194, Coiled-coil domain-containing protein 194, mousemouse

Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc194A0A140LIT1 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
Ccdc194A0A140LIT1 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ccdc194A0A140LIT1 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc194A0A140LIT1 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc194A0A140LIT1 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc194A0A140LIT1 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc194A0A140LIT1 Gm10657-201ENSMUST00000193528 1031 ntBASIC19.61■□□□□ 0.73
Ccdc194A0A140LIT1 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ccdc194A0A140LIT1 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc194A0A140LIT1 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc194A0A140LIT1 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc194A0A140LIT1 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ccdc194A0A140LIT1 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc194A0A140LIT1 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc194A0A140LIT1 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc194A0A140LIT1 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc194A0A140LIT1 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Ccdc194A0A140LIT1 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ccdc194A0A140LIT1 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc194A0A140LIT1 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc194A0A140LIT1 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ccdc194A0A140LIT1 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc194A0A140LIT1 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc194A0A140LIT1 Tmem132d-201ENSMUST00000044441 6139 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc194A0A140LIT1 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC19.59■□□□□ 0.73
Ccdc194A0A140LIT1 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc194A0A140LIT1 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ccdc194A0A140LIT1 Ubald2-201ENSMUST00000057676 1482 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc194A0A140LIT1 Gpr62-201ENSMUST00000164834 1977 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Ccdc194A0A140LIT1 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc194A0A140LIT1 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ccdc194A0A140LIT1 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc194A0A140LIT1 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc194A0A140LIT1 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ccdc194A0A140LIT1 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.58■□□□□ 0.72
Ccdc194A0A140LIT1 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.58■□□□□ 0.72
Ccdc194A0A140LIT1 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
Ccdc194A0A140LIT1 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc194A0A140LIT1 Bicdl2-201ENSMUST00000062967 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc194A0A140LIT1 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc194A0A140LIT1 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ccdc194A0A140LIT1 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc194A0A140LIT1 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
Ccdc194A0A140LIT1 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.57■□□□□ 0.72
Ccdc194A0A140LIT1 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ccdc194A0A140LIT1 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc194A0A140LIT1 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc194A0A140LIT1 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ccdc194A0A140LIT1 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ccdc194A0A140LIT1 Cln5-201ENSMUST00000022721 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc194A0A140LIT1 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc194A0A140LIT1 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
Ccdc194A0A140LIT1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc194A0A140LIT1 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc194A0A140LIT1 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc194A0A140LIT1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc194A0A140LIT1 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ccdc194A0A140LIT1 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Ccdc194A0A140LIT1 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.55■□□□□ 0.72
Ccdc194A0A140LIT1 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc194A0A140LIT1 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc194A0A140LIT1 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Ccdc194A0A140LIT1 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.55■□□□□ 0.72
Ccdc194A0A140LIT1 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Ccdc194A0A140LIT1 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc194A0A140LIT1 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc194A0A140LIT1 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC19.55■□□□□ 0.72
Ccdc194A0A140LIT1 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc194A0A140LIT1 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ccdc194A0A140LIT1 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc194A0A140LIT1 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc194A0A140LIT1 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc194A0A140LIT1 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc194A0A140LIT1 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc194A0A140LIT1 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ccdc194A0A140LIT1 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc194A0A140LIT1 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.54■□□□□ 0.72
Ccdc194A0A140LIT1 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc194A0A140LIT1 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
Ccdc194A0A140LIT1 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc194A0A140LIT1 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc194A0A140LIT1 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc194A0A140LIT1 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
Ccdc194A0A140LIT1 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc194A0A140LIT1 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc194A0A140LIT1 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc194A0A140LIT1 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc194A0A140LIT1 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
Ccdc194A0A140LIT1 Golph3-202ENSMUST00000226517 2359 ntBASIC19.54■□□□□ 0.72
Ccdc194A0A140LIT1 Rxrb-203ENSMUST00000173354 1743 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ccdc194A0A140LIT1 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc194A0A140LIT1 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc194A0A140LIT1 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc194A0A140LIT1 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Ccdc194A0A140LIT1 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Ccdc194A0A140LIT1 Gm6802-201ENSMUST00000167843 1983 ntBASIC19.53■□□□□ 0.72
Ccdc194A0A140LIT1 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc194A0A140LIT1 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc194A0A140LIT1 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Ccdc194A0A140LIT1 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms