Protein–RNA interactions for Protein: A0A0J9YTW6

Scn2a, Sodium channel protein, mousemouse

Predictions only

Length 2,006 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2aA0A0J9YTW6 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
Scn2aA0A0J9YTW6 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
Scn2aA0A0J9YTW6 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC18.17■□□□□ 0.5
Scn2aA0A0J9YTW6 Pus1-203ENSMUST00000086643 1868 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2aA0A0J9YTW6 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Scn2aA0A0J9YTW6 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC18.17■□□□□ 0.5
Scn2aA0A0J9YTW6 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2aA0A0J9YTW6 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2aA0A0J9YTW6 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2aA0A0J9YTW6 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Scn2aA0A0J9YTW6 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC18.17■□□□□ 0.5
Scn2aA0A0J9YTW6 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn2aA0A0J9YTW6 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC18.16■□□□□ 0.5
Scn2aA0A0J9YTW6 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn2aA0A0J9YTW6 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn2aA0A0J9YTW6 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn2aA0A0J9YTW6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scn2aA0A0J9YTW6 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn2aA0A0J9YTW6 Parl-201ENSMUST00000048642 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn2aA0A0J9YTW6 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn2aA0A0J9YTW6 Pou3f1-201ENSMUST00000053491 3849 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
Scn2aA0A0J9YTW6 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn2aA0A0J9YTW6 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Scn2aA0A0J9YTW6 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn2aA0A0J9YTW6 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Scn2aA0A0J9YTW6 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2aA0A0J9YTW6 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2aA0A0J9YTW6 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC18.15■□□□□ 0.5
Scn2aA0A0J9YTW6 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2aA0A0J9YTW6 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2aA0A0J9YTW6 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2aA0A0J9YTW6 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2aA0A0J9YTW6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2aA0A0J9YTW6 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2aA0A0J9YTW6 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Scn2aA0A0J9YTW6 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Scn2aA0A0J9YTW6 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Scn2aA0A0J9YTW6 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn2aA0A0J9YTW6 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn2aA0A0J9YTW6 Nrg3-203ENSMUST00000173780 2137 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Scn2aA0A0J9YTW6 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scn2aA0A0J9YTW6 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn2aA0A0J9YTW6 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn2aA0A0J9YTW6 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Scn2aA0A0J9YTW6 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC18.14■□□□□ 0.49
Scn2aA0A0J9YTW6 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn2aA0A0J9YTW6 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn2aA0A0J9YTW6 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn2aA0A0J9YTW6 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Scn2aA0A0J9YTW6 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC18.13■□□□□ 0.49
Scn2aA0A0J9YTW6 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC18.13■□□□□ 0.49
Scn2aA0A0J9YTW6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn2aA0A0J9YTW6 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn2aA0A0J9YTW6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Scn2aA0A0J9YTW6 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC18.13■□□□□ 0.49
Scn2aA0A0J9YTW6 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn2aA0A0J9YTW6 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn2aA0A0J9YTW6 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn2aA0A0J9YTW6 Gm21168-201ENSMUST00000199646 1096 ntBASIC18.13■□□□□ 0.49
Scn2aA0A0J9YTW6 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Scn2aA0A0J9YTW6 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn2aA0A0J9YTW6 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Scn2aA0A0J9YTW6 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn2aA0A0J9YTW6 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn2aA0A0J9YTW6 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn2aA0A0J9YTW6 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC18.12■□□□□ 0.49
Scn2aA0A0J9YTW6 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Scn2aA0A0J9YTW6 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn2aA0A0J9YTW6 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.11■□□□□ 0.49
Scn2aA0A0J9YTW6 Gm40848-201ENSMUST00000221998 324 ntBASIC18.11■□□□□ 0.49
Scn2aA0A0J9YTW6 Tsen54-201ENSMUST00000021134 1979 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn2aA0A0J9YTW6 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn2aA0A0J9YTW6 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn2aA0A0J9YTW6 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn2aA0A0J9YTW6 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn2aA0A0J9YTW6 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC18.11■□□□□ 0.49
Scn2aA0A0J9YTW6 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn2aA0A0J9YTW6 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn2aA0A0J9YTW6 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC18.11■□□□□ 0.49
Scn2aA0A0J9YTW6 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC18.11■□□□□ 0.49
Scn2aA0A0J9YTW6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn2aA0A0J9YTW6 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn2aA0A0J9YTW6 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn2aA0A0J9YTW6 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Scn2aA0A0J9YTW6 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC18.11■□□□□ 0.49
Scn2aA0A0J9YTW6 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Scn2aA0A0J9YTW6 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC18.1■□□□□ 0.49
Scn2aA0A0J9YTW6 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.1■□□□□ 0.49
Scn2aA0A0J9YTW6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn2aA0A0J9YTW6 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn2aA0A0J9YTW6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn2aA0A0J9YTW6 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn2aA0A0J9YTW6 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Scn2aA0A0J9YTW6 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Scn2aA0A0J9YTW6 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Scn2aA0A0J9YTW6 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC18.1■□□□□ 0.49
Scn2aA0A0J9YTW6 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC18.1■□□□□ 0.49
Scn2aA0A0J9YTW6 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Scn2aA0A0J9YTW6 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC18.1■□□□□ 0.49
Scn2aA0A0J9YTW6 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms