Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Fgfrl1-202ENSMUST00000112560 2318 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Celf6-203ENSMUST00000118549 2973 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Lrfn4-201ENSMUST00000053597 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Ncoa5-202ENSMUST00000121377 2930 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC13.56□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Gm13238-201ENSMUST00000117655 780 ntBASIC13.56□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC13.56□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-4A0A0G2JFX3 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Dusp26-201ENSMUST00000036631 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC13.55□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC13.55□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav13d-4A0A0G2JFX3 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.54□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Art5-204ENSMUST00000106937 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC13.53□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Gm10399-202ENSMUST00000202768 748 ntBASIC13.53□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC13.53□□□□□ -0.24
Trav13d-4A0A0G2JFX3 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Whrn-204ENSMUST00000095037 2419 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC13.52□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.24
Trav13d-4A0A0G2JFX3 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC13.52□□□□□ -0.25
Trav13d-4A0A0G2JFX3 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-4A0A0G2JFX3 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav13d-4A0A0G2JFX3 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms