Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Gm7332-201ENSMUST00000118351 454 ntBASIC14.85□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3n-3A0A0G2JEM0 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Ptger3-202ENSMUST00000173533 2097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.84□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Gm35558-201ENSMUST00000222675 2219 ntBASIC14.84□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3n-3A0A0G2JEM0 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC14.84□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.84□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trav3n-3A0A0G2JEM0 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav3n-3A0A0G2JEM0 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Fam105a-203ENSMUST00000226170 3043 ntBASIC14.83□□□□□ -0.04
Trav3n-3A0A0G2JEM0 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trav3n-3A0A0G2JEM0 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Gnptab-201ENSMUST00000020251 5390 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3n-3A0A0G2JEM0 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Dap3-201ENSMUST00000090938 4760 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC14.81□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC14.8□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3n-3A0A0G2JEM0 AC154231.1-201ENSMUST00000220564 2175 ntBASIC14.8□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC14.8□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Asph-217ENSMUST00000146441 2576 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC14.79□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav3n-3A0A0G2JEM0 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms