Protein–RNA interactions for Protein: A0A0B4J1P5

Trbv26, T cell receptor beta, variable 26 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv26A0A0B4J1P5 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Trbv26A0A0B4J1P5 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv26A0A0B4J1P5 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv26A0A0B4J1P5 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC16.4■□□□□ 0.22
Trbv26A0A0B4J1P5 Cbln2-201ENSMUST00000068423 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv26A0A0B4J1P5 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv26A0A0B4J1P5 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Trbv26A0A0B4J1P5 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv26A0A0B4J1P5 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv26A0A0B4J1P5 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv26A0A0B4J1P5 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Trbv26A0A0B4J1P5 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv26A0A0B4J1P5 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv26A0A0B4J1P5 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv26A0A0B4J1P5 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv26A0A0B4J1P5 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Trbv26A0A0B4J1P5 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv26A0A0B4J1P5 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv26A0A0B4J1P5 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv26A0A0B4J1P5 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv26A0A0B4J1P5 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv26A0A0B4J1P5 Mir7075-201ENSMUST00000184187 82 ntBASIC16.38■□□□□ 0.21
Trbv26A0A0B4J1P5 Gm7160-202ENSMUST00000188519 1027 ntBASIC16.38■□□□□ 0.21
Trbv26A0A0B4J1P5 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv26A0A0B4J1P5 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv26A0A0B4J1P5 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Trbv26A0A0B4J1P5 Trim47-201ENSMUST00000021120 2204 ntAPPRIS P4 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv26A0A0B4J1P5 Gm38160-201ENSMUST00000193090 2499 ntBASIC16.38■□□□□ 0.21
Trbv26A0A0B4J1P5 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Trbv26A0A0B4J1P5 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv26A0A0B4J1P5 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv26A0A0B4J1P5 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Trbv26A0A0B4J1P5 3830408C21Rik-205ENSMUST00000225426 1898 ntBASIC16.37■□□□□ 0.21
Trbv26A0A0B4J1P5 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv26A0A0B4J1P5 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv26A0A0B4J1P5 Ccnjl-201ENSMUST00000050574 2672 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv26A0A0B4J1P5 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
Trbv26A0A0B4J1P5 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv26A0A0B4J1P5 Cdkl3-202ENSMUST00000063321 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv26A0A0B4J1P5 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv26A0A0B4J1P5 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv26A0A0B4J1P5 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC16.37■□□□□ 0.21
Trbv26A0A0B4J1P5 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Trbv26A0A0B4J1P5 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Trbv26A0A0B4J1P5 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.37■□□□□ 0.21
Trbv26A0A0B4J1P5 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv26A0A0B4J1P5 Shisa5-202ENSMUST00000112059 1910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Trbv26A0A0B4J1P5 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv26A0A0B4J1P5 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Trbv26A0A0B4J1P5 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv26A0A0B4J1P5 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv26A0A0B4J1P5 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trbv26A0A0B4J1P5 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv26A0A0B4J1P5 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv26A0A0B4J1P5 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv26A0A0B4J1P5 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv26A0A0B4J1P5 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv26A0A0B4J1P5 Ss18l2-201ENSMUST00000035113 577 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv26A0A0B4J1P5 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trbv26A0A0B4J1P5 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv26A0A0B4J1P5 Ankrd33b-203ENSMUST00000110410 2070 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Trbv26A0A0B4J1P5 Olig1-201ENSMUST00000056882 2162 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Trbv26A0A0B4J1P5 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv26A0A0B4J1P5 Nr5a1-202ENSMUST00000112883 2994 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv26A0A0B4J1P5 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv26A0A0B4J1P5 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv26A0A0B4J1P5 Ost4-202ENSMUST00000132253 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv26A0A0B4J1P5 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv26A0A0B4J1P5 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv26A0A0B4J1P5 AC152827.1-201ENSMUST00000221143 2189 ntBASIC16.35■□□□□ 0.21
Trbv26A0A0B4J1P5 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv26A0A0B4J1P5 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv26A0A0B4J1P5 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC16.35■□□□□ 0.21
Trbv26A0A0B4J1P5 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Trbv26A0A0B4J1P5 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC16.34■□□□□ 0.21
Trbv26A0A0B4J1P5 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Trbv26A0A0B4J1P5 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.34■□□□□ 0.21
Trbv26A0A0B4J1P5 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Trbv26A0A0B4J1P5 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv26A0A0B4J1P5 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
Trbv26A0A0B4J1P5 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC16.34■□□□□ 0.21
Trbv26A0A0B4J1P5 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC16.34■□□□□ 0.21
Trbv26A0A0B4J1P5 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv26A0A0B4J1P5 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv26A0A0B4J1P5 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv26A0A0B4J1P5 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Trbv26A0A0B4J1P5 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC16.33■□□□□ 0.21
Trbv26A0A0B4J1P5 Gm37035-201ENSMUST00000194809 2148 ntBASIC16.33■□□□□ 0.21
Trbv26A0A0B4J1P5 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv26A0A0B4J1P5 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Trbv26A0A0B4J1P5 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv26A0A0B4J1P5 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv26A0A0B4J1P5 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv26A0A0B4J1P5 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv26A0A0B4J1P5 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC16.33■□□□□ 0.2
Trbv26A0A0B4J1P5 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv26A0A0B4J1P5 Zbtb7a-202ENSMUST00000117956 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv26A0A0B4J1P5 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv26A0A0B4J1P5 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Trbv26A0A0B4J1P5 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms