Protein–RNA interactions for Protein: A0A0B4J1K2

Trav9-4, T cell receptor alpha variable 9-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9-4A0A0B4J1K2 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9-4A0A0B4J1K2 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9-4A0A0B4J1K2 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9-4A0A0B4J1K2 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trav9-4A0A0B4J1K2 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9-4A0A0B4J1K2 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9-4A0A0B4J1K2 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9-4A0A0B4J1K2 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9-4A0A0B4J1K2 Gm12821-201ENSMUST00000120022 600 ntBASIC14.79□□□□□ -0.04
Trav9-4A0A0B4J1K2 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Trav9-4A0A0B4J1K2 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trav9-4A0A0B4J1K2 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav9-4A0A0B4J1K2 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC14.79□□□□□ -0.04
Trav9-4A0A0B4J1K2 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9-4A0A0B4J1K2 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9-4A0A0B4J1K2 Gm5576-201ENSMUST00000075809 1236 ntBASIC14.79□□□□□ -0.04
Trav9-4A0A0B4J1K2 Ttc9b-201ENSMUST00000008088 2052 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9-4A0A0B4J1K2 Sort1-203ENSMUST00000135636 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9-4A0A0B4J1K2 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trav9-4A0A0B4J1K2 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-4A0A0B4J1K2 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trav9-4A0A0B4J1K2 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-4A0A0B4J1K2 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-4A0A0B4J1K2 Syt7-203ENSMUST00000169121 6834 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav9-4A0A0B4J1K2 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Trav9-4A0A0B4J1K2 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-4A0A0B4J1K2 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC14.78□□□□□ -0.04
Trav9-4A0A0B4J1K2 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-4A0A0B4J1K2 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC14.78□□□□□ -0.04
Trav9-4A0A0B4J1K2 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav9-4A0A0B4J1K2 Gm27454-201ENSMUST00000185090 204 ntBASIC14.78□□□□□ -0.04
Trav9-4A0A0B4J1K2 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-4A0A0B4J1K2 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav9-4A0A0B4J1K2 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-4A0A0B4J1K2 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-4A0A0B4J1K2 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-4A0A0B4J1K2 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-4A0A0B4J1K2 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-4A0A0B4J1K2 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-4A0A0B4J1K2 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-4A0A0B4J1K2 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trav9-4A0A0B4J1K2 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trav9-4A0A0B4J1K2 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav9-4A0A0B4J1K2 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Trav9-4A0A0B4J1K2 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC14.77□□□□□ -0.05
Trav9-4A0A0B4J1K2 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trav9-4A0A0B4J1K2 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Trav9-4A0A0B4J1K2 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9-4A0A0B4J1K2 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9-4A0A0B4J1K2 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav9-4A0A0B4J1K2 Podxl-201ENSMUST00000026698 5379 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9-4A0A0B4J1K2 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Trav9-4A0A0B4J1K2 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC14.77□□□□□ -0.05
Trav9-4A0A0B4J1K2 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trav9-4A0A0B4J1K2 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Trav9-4A0A0B4J1K2 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
Trav9-4A0A0B4J1K2 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-4A0A0B4J1K2 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-4A0A0B4J1K2 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-4A0A0B4J1K2 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-4A0A0B4J1K2 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-4A0A0B4J1K2 Nr2c2ap-201ENSMUST00000095273 1161 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-4A0A0B4J1K2 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Trav9-4A0A0B4J1K2 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.76□□□□□ -0.05
Trav9-4A0A0B4J1K2 Pycr2-201ENSMUST00000027802 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-4A0A0B4J1K2 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Trav9-4A0A0B4J1K2 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav9-4A0A0B4J1K2 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trav9-4A0A0B4J1K2 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9-4A0A0B4J1K2 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9-4A0A0B4J1K2 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9-4A0A0B4J1K2 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC14.75□□□□□ -0.05
Trav9-4A0A0B4J1K2 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9-4A0A0B4J1K2 Tusc3-202ENSMUST00000169034 1262 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9-4A0A0B4J1K2 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9-4A0A0B4J1K2 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC14.75□□□□□ -0.05
Trav9-4A0A0B4J1K2 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trav9-4A0A0B4J1K2 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9-4A0A0B4J1K2 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Trav9-4A0A0B4J1K2 Tmem230-206ENSMUST00000180286 1531 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Trav9-4A0A0B4J1K2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav9-4A0A0B4J1K2 Gm6085-201ENSMUST00000182774 1470 ntBASIC14.75□□□□□ -0.05
Trav9-4A0A0B4J1K2 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9-4A0A0B4J1K2 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9-4A0A0B4J1K2 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Trav9-4A0A0B4J1K2 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC14.74□□□□□ -0.05
Trav9-4A0A0B4J1K2 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC14.74□□□□□ -0.05
Trav9-4A0A0B4J1K2 Gm45417-201ENSMUST00000209533 758 ntBASIC14.74□□□□□ -0.05
Trav9-4A0A0B4J1K2 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9-4A0A0B4J1K2 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9-4A0A0B4J1K2 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9-4A0A0B4J1K2 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9-4A0A0B4J1K2 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav9-4A0A0B4J1K2 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9-4A0A0B4J1K2 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9-4A0A0B4J1K2 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Trav9-4A0A0B4J1K2 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav9-4A0A0B4J1K2 Gm15043-201ENSMUST00000118843 1543 ntBASIC14.73□□□□□ -0.05
Trav9-4A0A0B4J1K2 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC14.73□□□□□ -0.05
Trav9-4A0A0B4J1K2 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms