Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trbv16A0A0B4J1H3 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trbv16A0A0B4J1H3 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv16A0A0B4J1H3 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv16A0A0B4J1H3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv16A0A0B4J1H3 Gm43530-201ENSMUST00000195920 274 ntBASIC14.28□□□□□ -0.12
Trbv16A0A0B4J1H3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv16A0A0B4J1H3 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv16A0A0B4J1H3 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv16A0A0B4J1H3 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
Trbv16A0A0B4J1H3 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trbv16A0A0B4J1H3 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC14.27□□□□□ -0.12
Trbv16A0A0B4J1H3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.27□□□□□ -0.12
Trbv16A0A0B4J1H3 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv16A0A0B4J1H3 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC14.27□□□□□ -0.12
Trbv16A0A0B4J1H3 Pold2-201ENSMUST00000102922 1646 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv16A0A0B4J1H3 Msantd3-203ENSMUST00000107704 1597 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trbv16A0A0B4J1H3 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Trbv16A0A0B4J1H3 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv16A0A0B4J1H3 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC14.27□□□□□ -0.13
Trbv16A0A0B4J1H3 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv16A0A0B4J1H3 Nfkbib-202ENSMUST00000085851 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv16A0A0B4J1H3 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv16A0A0B4J1H3 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv16A0A0B4J1H3 Dcbld1-203ENSMUST00000218582 2795 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv16A0A0B4J1H3 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv16A0A0B4J1H3 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trbv16A0A0B4J1H3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv16A0A0B4J1H3 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv16A0A0B4J1H3 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC14.26□□□□□ -0.13
Trbv16A0A0B4J1H3 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv16A0A0B4J1H3 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC14.26□□□□□ -0.13
Trbv16A0A0B4J1H3 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trbv16A0A0B4J1H3 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv16A0A0B4J1H3 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv16A0A0B4J1H3 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv16A0A0B4J1H3 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC14.26□□□□□ -0.13
Trbv16A0A0B4J1H3 Csnk1a1-207ENSMUST00000166990 1860 ntTSL 5 BASIC14.26□□□□□ -0.13
Trbv16A0A0B4J1H3 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Trbv16A0A0B4J1H3 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv16A0A0B4J1H3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv16A0A0B4J1H3 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trbv16A0A0B4J1H3 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv16A0A0B4J1H3 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trbv16A0A0B4J1H3 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv16A0A0B4J1H3 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv16A0A0B4J1H3 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv16A0A0B4J1H3 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv16A0A0B4J1H3 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv16A0A0B4J1H3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv16A0A0B4J1H3 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv16A0A0B4J1H3 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv16A0A0B4J1H3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv16A0A0B4J1H3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trbv16A0A0B4J1H3 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv16A0A0B4J1H3 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv16A0A0B4J1H3 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv16A0A0B4J1H3 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trbv16A0A0B4J1H3 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv16A0A0B4J1H3 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.24□□□□□ -0.13
Trbv16A0A0B4J1H3 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Trbv16A0A0B4J1H3 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC14.24□□□□□ -0.13
Trbv16A0A0B4J1H3 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trbv16A0A0B4J1H3 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv16A0A0B4J1H3 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Trbv16A0A0B4J1H3 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv16A0A0B4J1H3 Cdc20-201ENSMUST00000006565 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trbv16A0A0B4J1H3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv16A0A0B4J1H3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv16A0A0B4J1H3 Pdzd3-201ENSMUST00000034618 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv16A0A0B4J1H3 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv16A0A0B4J1H3 Gm9870-201ENSMUST00000063874 645 ntBASIC14.23□□□□□ -0.13
Trbv16A0A0B4J1H3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Trbv16A0A0B4J1H3 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv16A0A0B4J1H3 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC14.23□□□□□ -0.13
Trbv16A0A0B4J1H3 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv16A0A0B4J1H3 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv16A0A0B4J1H3 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC14.23□□□□□ -0.13
Trbv16A0A0B4J1H3 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trbv16A0A0B4J1H3 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv16A0A0B4J1H3 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv16A0A0B4J1H3 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv16A0A0B4J1H3 Stac3-202ENSMUST00000160019 1581 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv16A0A0B4J1H3 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv16A0A0B4J1H3 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trbv16A0A0B4J1H3 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv16A0A0B4J1H3 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv16A0A0B4J1H3 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC14.22□□□□□ -0.13
Trbv16A0A0B4J1H3 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trbv16A0A0B4J1H3 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC14.22□□□□□ -0.13
Trbv16A0A0B4J1H3 Gm18755-201ENSMUST00000218030 1099 ntBASIC14.22□□□□□ -0.13
Trbv16A0A0B4J1H3 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Trbv16A0A0B4J1H3 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
Trbv16A0A0B4J1H3 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv16A0A0B4J1H3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv16A0A0B4J1H3 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trbv16A0A0B4J1H3 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv16A0A0B4J1H3 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv16A0A0B4J1H3 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trbv16A0A0B4J1H3 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms