Protein–RNA interactions for Protein: A0A0A6YYP6

Sirpb1a, Signal-regulatory protein beta 1A, mousemouse

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sirpb1aA0A0A6YYP6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC18.67■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC18.67■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC18.67■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Gm7143-201ENSMUST00000222811 859 ntBASIC18.67■□□□□ 0.58
Sirpb1aA0A0A6YYP6 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Fbxo45-201ENSMUST00000042732 4179 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.66■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Anapc5-205ENSMUST00000197074 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Anapc5-212ENSMUST00000199406 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
Sirpb1aA0A0A6YYP6 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.64■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC18.64■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC18.64■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC18.63■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.63■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC18.62■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Slc35f4-202ENSMUST00000123534 2748 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.61■□□□□ 0.57
Sirpb1aA0A0A6YYP6 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC18.61■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Gm5921-201ENSMUST00000075898 882 ntBASIC18.6■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC18.59■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Cdkn3-203ENSMUST00000227149 1952 ntBASIC18.59■□□□□ 0.57
Sirpb1aA0A0A6YYP6 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC18.59■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Gm13238-201ENSMUST00000117655 780 ntBASIC18.59■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Mir6236-201ENSMUST00000184437 123 ntBASIC18.59■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Gm43566-201ENSMUST00000196851 808 ntBASIC18.59■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Hyal2-203ENSMUST00000193747 1532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Sirpb1aA0A0A6YYP6 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.57
Sirpb1aA0A0A6YYP6 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC18.58■□□□□ 0.56
Sirpb1aA0A0A6YYP6 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.58■□□□□ 0.56
Sirpb1aA0A0A6YYP6 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
Sirpb1aA0A0A6YYP6 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 335.8 ms