Protein–RNA interactions for Protein: A0A0A6YXC3

Ighv1-52, Immunoglobulin heavy variable 1-52 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-52A0A0A6YXC3 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC15□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ighv1-52A0A0A6YXC3 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC14.99□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Ighv1-52A0A0A6YXC3 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC14.98□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Psmg4-202ENSMUST00000147632 555 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC14.98□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Mgll-202ENSMUST00000113581 1308 ntTSL 5 BASIC14.97□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Hoxc11-201ENSMUST00000001701 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Dtnb-216ENSMUST00000173736 2175 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Ighv1-52A0A0A6YXC3 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC14.97□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Lrfn1-201ENSMUST00000055110 1479 ntAPPRIS P3 TSL 5 BASIC14.97□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC14.97□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Gm8493-201ENSMUST00000196881 489 ntBASIC14.97□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.97□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC14.97□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Fbxl15-202ENSMUST00000177667 1243 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC14.96□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-52A0A0A6YXC3 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC14.96□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Ighv1-52A0A0A6YXC3 Adrm1-201ENSMUST00000061437 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
Ighv1-52A0A0A6YXC3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Gm43909-201ENSMUST00000203443 1876 ntBASIC14.95□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Pbx1-202ENSMUST00000072863 1709 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Cdkn3-203ENSMUST00000227149 1952 ntBASIC14.95□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Klhl15-205ENSMUST00000113916 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC14.95□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Aplp1-201ENSMUST00000006828 2343 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC14.94□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv1-52A0A0A6YXC3 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 19.1 ms