Protein–RNA interactions for Protein: A0A0A6YW26

Ighv8-4, Immunoglobulin heavy variable V8-4 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv8-4A0A0A6YW26 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Ighv8-4A0A0A6YW26 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ighv8-4A0A0A6YW26 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv8-4A0A0A6YW26 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC14.94□□□□□ -0.02
Ighv8-4A0A0A6YW26 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv8-4A0A0A6YW26 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv8-4A0A0A6YW26 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ighv8-4A0A0A6YW26 Pcgf6-201ENSMUST00000026032 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv8-4A0A0A6YW26 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv8-4A0A0A6YW26 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv8-4A0A0A6YW26 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv8-4A0A0A6YW26 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Ighv8-4A0A0A6YW26 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC14.94□□□□□ -0.02
Ighv8-4A0A0A6YW26 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv8-4A0A0A6YW26 Tmem102-201ENSMUST00000051025 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Ighv8-4A0A0A6YW26 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv8-4A0A0A6YW26 Rims1-209ENSMUST00000218140 1434 ntTSL 5 BASIC14.93□□□□□ -0.02
Ighv8-4A0A0A6YW26 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv8-4A0A0A6YW26 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv8-4A0A0A6YW26 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv8-4A0A0A6YW26 Kctd20-204ENSMUST00000122163 2423 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ighv8-4A0A0A6YW26 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ighv8-4A0A0A6YW26 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv8-4A0A0A6YW26 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC14.93□□□□□ -0.02
Ighv8-4A0A0A6YW26 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv8-4A0A0A6YW26 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv8-4A0A0A6YW26 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv8-4A0A0A6YW26 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ighv8-4A0A0A6YW26 Gramd1a-202ENSMUST00000085636 2543 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Ighv8-4A0A0A6YW26 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv8-4A0A0A6YW26 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ighv8-4A0A0A6YW26 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC14.92□□□□□ -0.02
Ighv8-4A0A0A6YW26 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv8-4A0A0A6YW26 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC14.92□□□□□ -0.02
Ighv8-4A0A0A6YW26 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv8-4A0A0A6YW26 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC14.92□□□□□ -0.02
Ighv8-4A0A0A6YW26 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv8-4A0A0A6YW26 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv8-4A0A0A6YW26 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv8-4A0A0A6YW26 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv8-4A0A0A6YW26 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv8-4A0A0A6YW26 Sdhaf1-201ENSMUST00000098586 2490 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Ighv8-4A0A0A6YW26 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv8-4A0A0A6YW26 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Ighv8-4A0A0A6YW26 Tpm1-212ENSMUST00000113696 1714 ntTSL 2 BASIC14.92□□□□□ -0.02
Ighv8-4A0A0A6YW26 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ighv8-4A0A0A6YW26 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ighv8-4A0A0A6YW26 Rnf8-201ENSMUST00000024817 2077 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ighv8-4A0A0A6YW26 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ighv8-4A0A0A6YW26 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ighv8-4A0A0A6YW26 Zfp653-202ENSMUST00000179605 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ighv8-4A0A0A6YW26 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ighv8-4A0A0A6YW26 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ighv8-4A0A0A6YW26 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ighv8-4A0A0A6YW26 Gm15039-201ENSMUST00000118914 875 ntBASIC14.91□□□□□ -0.02
Ighv8-4A0A0A6YW26 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ighv8-4A0A0A6YW26 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC14.91□□□□□ -0.02
Ighv8-4A0A0A6YW26 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC14.91□□□□□ -0.02
Ighv8-4A0A0A6YW26 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ighv8-4A0A0A6YW26 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
Ighv8-4A0A0A6YW26 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ighv8-4A0A0A6YW26 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ighv8-4A0A0A6YW26 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ighv8-4A0A0A6YW26 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ighv8-4A0A0A6YW26 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC14.9□□□□□ -0.02
Ighv8-4A0A0A6YW26 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv8-4A0A0A6YW26 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv8-4A0A0A6YW26 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.9□□□□□ -0.02
Ighv8-4A0A0A6YW26 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv8-4A0A0A6YW26 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC14.9□□□□□ -0.02
Ighv8-4A0A0A6YW26 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv8-4A0A0A6YW26 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv8-4A0A0A6YW26 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv8-4A0A0A6YW26 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC14.9□□□□□ -0.02
Ighv8-4A0A0A6YW26 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv8-4A0A0A6YW26 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv8-4A0A0A6YW26 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv8-4A0A0A6YW26 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv8-4A0A0A6YW26 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv8-4A0A0A6YW26 Magi2-203ENSMUST00000115267 4478 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv8-4A0A0A6YW26 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ighv8-4A0A0A6YW26 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv8-4A0A0A6YW26 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv8-4A0A0A6YW26 Cotl1-202ENSMUST00000168698 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv8-4A0A0A6YW26 Ovol2-201ENSMUST00000037423 1539 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv8-4A0A0A6YW26 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv8-4A0A0A6YW26 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv8-4A0A0A6YW26 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
Ighv8-4A0A0A6YW26 Gm13241-201ENSMUST00000094493 780 ntBASIC14.89□□□□□ -0.03
Ighv8-4A0A0A6YW26 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC14.89□□□□□ -0.03
Ighv8-4A0A0A6YW26 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv8-4A0A0A6YW26 Hsf1-204ENSMUST00000226872 2104 ntBASIC14.89□□□□□ -0.03
Ighv8-4A0A0A6YW26 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv8-4A0A0A6YW26 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC14.89□□□□□ -0.03
Ighv8-4A0A0A6YW26 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv8-4A0A0A6YW26 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Ighv8-4A0A0A6YW26 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Ighv8-4A0A0A6YW26 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv8-4A0A0A6YW26 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Ighv8-4A0A0A6YW26 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms