Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-3A0A075B6A4 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-3A0A075B6A4 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-3A0A075B6A4 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC14.76□□□□□ -0.05
Trav12d-3A0A075B6A4 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-3A0A075B6A4 Foxp1-230ENSMUST00000177437 2468 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-3A0A075B6A4 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-3A0A075B6A4 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-3A0A075B6A4 Naa30-205ENSMUST00000153488 4446 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-3A0A075B6A4 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-3A0A075B6A4 Galnt3-201ENSMUST00000028378 3885 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-3A0A075B6A4 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-3A0A075B6A4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-3A0A075B6A4 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Trav12d-3A0A075B6A4 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-3A0A075B6A4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-3A0A075B6A4 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Trav12d-3A0A075B6A4 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12d-3A0A075B6A4 BC021767-201ENSMUST00000126387 1716 ntBASIC14.75□□□□□ -0.05
Trav12d-3A0A075B6A4 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12d-3A0A075B6A4 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12d-3A0A075B6A4 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12d-3A0A075B6A4 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12d-3A0A075B6A4 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12d-3A0A075B6A4 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12d-3A0A075B6A4 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Trav12d-3A0A075B6A4 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Trav12d-3A0A075B6A4 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12d-3A0A075B6A4 Gm10575-201ENSMUST00000097947 1671 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12d-3A0A075B6A4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12d-3A0A075B6A4 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12d-3A0A075B6A4 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12d-3A0A075B6A4 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12d-3A0A075B6A4 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Trav12d-3A0A075B6A4 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC14.74□□□□□ -0.05
Trav12d-3A0A075B6A4 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12d-3A0A075B6A4 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12d-3A0A075B6A4 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Trav12d-3A0A075B6A4 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12d-3A0A075B6A4 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12d-3A0A075B6A4 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC14.74□□□□□ -0.05
Trav12d-3A0A075B6A4 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Trav12d-3A0A075B6A4 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12d-3A0A075B6A4 Lrrc36-202ENSMUST00000109355 2411 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
Trav12d-3A0A075B6A4 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12d-3A0A075B6A4 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12d-3A0A075B6A4 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12d-3A0A075B6A4 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12d-3A0A075B6A4 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12d-3A0A075B6A4 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Trav12d-3A0A075B6A4 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12d-3A0A075B6A4 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12d-3A0A075B6A4 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12d-3A0A075B6A4 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12d-3A0A075B6A4 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12d-3A0A075B6A4 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12d-3A0A075B6A4 Fam189a1-201ENSMUST00000119118 4801 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav12d-3A0A075B6A4 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Trav12d-3A0A075B6A4 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Trav12d-3A0A075B6A4 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12d-3A0A075B6A4 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC14.72□□□□□ -0.05
Trav12d-3A0A075B6A4 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12d-3A0A075B6A4 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12d-3A0A075B6A4 1700003E16Rik-202ENSMUST00000203203 2070 ntTSL 2 BASIC14.72□□□□□ -0.05
Trav12d-3A0A075B6A4 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Trav12d-3A0A075B6A4 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12d-3A0A075B6A4 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12d-3A0A075B6A4 Sbspon-201ENSMUST00000040695 2748 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12d-3A0A075B6A4 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12d-3A0A075B6A4 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12d-3A0A075B6A4 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12d-3A0A075B6A4 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12d-3A0A075B6A4 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC14.72□□□□□ -0.05
Trav12d-3A0A075B6A4 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC14.72□□□□□ -0.05
Trav12d-3A0A075B6A4 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12d-3A0A075B6A4 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12d-3A0A075B6A4 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12d-3A0A075B6A4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12d-3A0A075B6A4 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12d-3A0A075B6A4 Cxxc1-201ENSMUST00000025444 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12d-3A0A075B6A4 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12d-3A0A075B6A4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12d-3A0A075B6A4 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12d-3A0A075B6A4 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC14.71□□□□□ -0.05
Trav12d-3A0A075B6A4 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Trav12d-3A0A075B6A4 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav12d-3A0A075B6A4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav12d-3A0A075B6A4 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Trav12d-3A0A075B6A4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav12d-3A0A075B6A4 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC14.71□□□□□ -0.06
Trav12d-3A0A075B6A4 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
Trav12d-3A0A075B6A4 Tmem8-201ENSMUST00000025010 3464 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Trav12d-3A0A075B6A4 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.06
Trav12d-3A0A075B6A4 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12d-3A0A075B6A4 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12d-3A0A075B6A4 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav12d-3A0A075B6A4 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Trav12d-3A0A075B6A4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Trav12d-3A0A075B6A4 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Trav12d-3A0A075B6A4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms