Protein–RNA interactions for Protein: A0A075B650

Trav15-2-dv6-2, T cell receptor alpha variable 15-2-DV6-2 (Fragment), mousemouse

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-2-dv6-2A0A075B650 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Ung-201ENSMUST00000031587 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Map3k9-201ENSMUST00000035987 4564 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Lrfn4-202ENSMUST00000113822 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Rhbdf1-201ENSMUST00000020524 2946 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC16.09■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Sumf1-201ENSMUST00000032191 2593 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Fzd2-201ENSMUST00000057893 3663 ntAPPRIS P1 BASIC16.08■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trav15-2-dv6-2A0A075B650 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Golph3-205ENSMUST00000228671 2842 ntBASIC16.08■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Ubp1-201ENSMUST00000009885 3742 ntAPPRIS ALT1 TSL 5 BASIC16.08■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC16.08■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC16.08■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Gas2-203ENSMUST00000107591 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Arhgef1-204ENSMUST00000117796 3508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC16.07■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC16.07■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC16.07■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Gm7143-201ENSMUST00000222811 859 ntBASIC16.07■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.07■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Ptar1-201ENSMUST00000099560 2064 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC16.06■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.05■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Gm13238-201ENSMUST00000117655 780 ntBASIC16.05■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC16.05■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC16.05■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC16.05■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Enah-203ENSMUST00000111025 3385 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.04■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.04■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC16.04■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trav15-2-dv6-2A0A075B650 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms