Protein–RNA interactions for Protein: A0A075B639

Trav6-7-dv9, T cell receptor alpha variable 6-7-DV9 (Fragment), mousemouse

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-7-dv9A0A075B639 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-7-dv9A0A075B639 Gm27045-201ENSMUST00000182145 1402 ntBASIC17.48■□□□□ 0.39
Trav6-7-dv9A0A075B639 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC17.48■□□□□ 0.39
Trav6-7-dv9A0A075B639 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-7-dv9A0A075B639 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC17.48■□□□□ 0.39
Trav6-7-dv9A0A075B639 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-7-dv9A0A075B639 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.48■□□□□ 0.39
Trav6-7-dv9A0A075B639 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC17.48■□□□□ 0.39
Trav6-7-dv9A0A075B639 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-7-dv9A0A075B639 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Trav6-7-dv9A0A075B639 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-7-dv9A0A075B639 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-7-dv9A0A075B639 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-7-dv9A0A075B639 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
Trav6-7-dv9A0A075B639 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
Trav6-7-dv9A0A075B639 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-7-dv9A0A075B639 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC17.47■□□□□ 0.39
Trav6-7-dv9A0A075B639 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-7-dv9A0A075B639 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-7-dv9A0A075B639 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-7-dv9A0A075B639 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Trav6-7-dv9A0A075B639 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-7-dv9A0A075B639 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-7-dv9A0A075B639 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-7-dv9A0A075B639 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-7-dv9A0A075B639 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Trav6-7-dv9A0A075B639 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-7-dv9A0A075B639 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-7-dv9A0A075B639 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Trav6-7-dv9A0A075B639 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trav6-7-dv9A0A075B639 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-7-dv9A0A075B639 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-7-dv9A0A075B639 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.45■□□□□ 0.38
Trav6-7-dv9A0A075B639 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-7-dv9A0A075B639 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Trav6-7-dv9A0A075B639 Gm12922-201ENSMUST00000120626 809 ntBASIC17.45■□□□□ 0.38
Trav6-7-dv9A0A075B639 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-7-dv9A0A075B639 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-7-dv9A0A075B639 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-7-dv9A0A075B639 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-7-dv9A0A075B639 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-7-dv9A0A075B639 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-7-dv9A0A075B639 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC17.45■□□□□ 0.38
Trav6-7-dv9A0A075B639 Lrig1-202ENSMUST00000101126 4951 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trav6-7-dv9A0A075B639 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6-7-dv9A0A075B639 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.44■□□□□ 0.38
Trav6-7-dv9A0A075B639 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trav6-7-dv9A0A075B639 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6-7-dv9A0A075B639 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Trav6-7-dv9A0A075B639 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6-7-dv9A0A075B639 Ankrd9-203ENSMUST00000135131 1563 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6-7-dv9A0A075B639 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6-7-dv9A0A075B639 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trav6-7-dv9A0A075B639 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.44■□□□□ 0.38
Trav6-7-dv9A0A075B639 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trav6-7-dv9A0A075B639 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.43■□□□□ 0.38
Trav6-7-dv9A0A075B639 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-7-dv9A0A075B639 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trav6-7-dv9A0A075B639 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Trav6-7-dv9A0A075B639 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC17.43■□□□□ 0.38
Trav6-7-dv9A0A075B639 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC17.43■□□□□ 0.38
Trav6-7-dv9A0A075B639 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-7-dv9A0A075B639 Golgb1-201ENSMUST00000023534 498 ntBASIC17.43■□□□□ 0.38
Trav6-7-dv9A0A075B639 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-7-dv9A0A075B639 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-7-dv9A0A075B639 Ankrd9-201ENSMUST00000043459 1706 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-7-dv9A0A075B639 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-7-dv9A0A075B639 Gm6085-201ENSMUST00000182774 1470 ntBASIC17.43■□□□□ 0.38
Trav6-7-dv9A0A075B639 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-7-dv9A0A075B639 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-7-dv9A0A075B639 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Trav6-7-dv9A0A075B639 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trav6-7-dv9A0A075B639 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav6-7-dv9A0A075B639 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-7-dv9A0A075B639 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-7-dv9A0A075B639 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Trav6-7-dv9A0A075B639 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-7-dv9A0A075B639 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-7-dv9A0A075B639 Syt6-205ENSMUST00000121834 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-7-dv9A0A075B639 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-7-dv9A0A075B639 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC17.42■□□□□ 0.38
Trav6-7-dv9A0A075B639 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-7-dv9A0A075B639 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-7-dv9A0A075B639 Ddost-201ENSMUST00000030538 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-7-dv9A0A075B639 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trav6-7-dv9A0A075B639 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC17.42■□□□□ 0.38
Trav6-7-dv9A0A075B639 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-7-dv9A0A075B639 Uba2-201ENSMUST00000102746 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-7-dv9A0A075B639 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-7-dv9A0A075B639 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-7-dv9A0A075B639 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav6-7-dv9A0A075B639 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-7-dv9A0A075B639 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav6-7-dv9A0A075B639 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-7-dv9A0A075B639 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC17.41■□□□□ 0.38
Trav6-7-dv9A0A075B639 Slc9a2-203ENSMUST00000192345 2507 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trav6-7-dv9A0A075B639 Ugdh-201ENSMUST00000031103 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-7-dv9A0A075B639 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-7-dv9A0A075B639 Pthlh-201ENSMUST00000052296 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Trav6-7-dv9A0A075B639 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 15.3 ms