Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-1A0A075B606 Lmo2-208ENSMUST00000170926 1529 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Trav13d-1A0A075B606 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-1A0A075B606 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-1A0A075B606 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trav13d-1A0A075B606 Fez1-201ENSMUST00000034630 1794 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-1A0A075B606 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-1A0A075B606 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC14.39□□□□□ -0.11
Trav13d-1A0A075B606 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-1A0A075B606 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC14.39□□□□□ -0.11
Trav13d-1A0A075B606 Gm14207-203ENSMUST00000156538 988 ntTSL 2 BASIC14.39□□□□□ -0.11
Trav13d-1A0A075B606 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Trav13d-1A0A075B606 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.39□□□□□ -0.11
Trav13d-1A0A075B606 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC14.39□□□□□ -0.11
Trav13d-1A0A075B606 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-1A0A075B606 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-1A0A075B606 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Trav13d-1A0A075B606 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-1A0A075B606 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-1A0A075B606 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-1A0A075B606 Ankle2-201ENSMUST00000031474 5215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-1A0A075B606 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-1A0A075B606 Klc3-201ENSMUST00000047170 1901 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Trav13d-1A0A075B606 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-1A0A075B606 Cdkl3-210ENSMUST00000121591 2387 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-1A0A075B606 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-1A0A075B606 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-1A0A075B606 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-1A0A075B606 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC14.38□□□□□ -0.11
Trav13d-1A0A075B606 Gm21168-201ENSMUST00000199646 1096 ntBASIC14.38□□□□□ -0.11
Trav13d-1A0A075B606 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Trav13d-1A0A075B606 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC14.38□□□□□ -0.11
Trav13d-1A0A075B606 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-1A0A075B606 Stn1-201ENSMUST00000049369 1992 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-1A0A075B606 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav13d-1A0A075B606 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-1A0A075B606 Snhg20-203ENSMUST00000182811 2153 ntBASIC14.37□□□□□ -0.11
Trav13d-1A0A075B606 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-1A0A075B606 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-1A0A075B606 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-1A0A075B606 Rexo5-201ENSMUST00000033218 1966 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-1A0A075B606 Gm12251-201ENSMUST00000117893 792 ntBASIC14.37□□□□□ -0.11
Trav13d-1A0A075B606 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-1A0A075B606 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-1A0A075B606 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav13d-1A0A075B606 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-1A0A075B606 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav13d-1A0A075B606 Rell2-212ENSMUST00000177058 1762 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav13d-1A0A075B606 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC14.37□□□□□ -0.11
Trav13d-1A0A075B606 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav13d-1A0A075B606 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-1A0A075B606 Hnrnpa3-204ENSMUST00000111964 1654 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-1A0A075B606 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav13d-1A0A075B606 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-1A0A075B606 1700086O06Rik-202ENSMUST00000181871 1564 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-1A0A075B606 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-1A0A075B606 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-1A0A075B606 Prodh-206ENSMUST00000139861 677 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-1A0A075B606 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav13d-1A0A075B606 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-1A0A075B606 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-1A0A075B606 Map4k4-201ENSMUST00000163854 5782 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Trav13d-1A0A075B606 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-1A0A075B606 Rgs19-201ENSMUST00000002532 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav13d-1A0A075B606 Gm34220-201ENSMUST00000223001 2709 ntBASIC14.35□□□□□ -0.11
Trav13d-1A0A075B606 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-1A0A075B606 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-1A0A075B606 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-1A0A075B606 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-1A0A075B606 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-1A0A075B606 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC14.35□□□□□ -0.11
Trav13d-1A0A075B606 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC14.35□□□□□ -0.11
Trav13d-1A0A075B606 Spcs1-204ENSMUST00000226782 949 ntBASIC14.35□□□□□ -0.11
Trav13d-1A0A075B606 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-1A0A075B606 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-1A0A075B606 Bag5-202ENSMUST00000160576 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-1A0A075B606 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-1A0A075B606 Prmt1-202ENSMUST00000107843 1508 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-1A0A075B606 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-1A0A075B606 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav13d-1A0A075B606 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-1A0A075B606 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-1A0A075B606 Rabgap1l-216ENSMUST00000195442 1877 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-1A0A075B606 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-1A0A075B606 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Trav13d-1A0A075B606 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-1A0A075B606 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav13d-1A0A075B606 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC14.34□□□□□ -0.11
Trav13d-1A0A075B606 Gm43173-201ENSMUST00000202246 593 ntBASIC14.34□□□□□ -0.11
Trav13d-1A0A075B606 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav13d-1A0A075B606 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-1A0A075B606 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav13d-1A0A075B606 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-1A0A075B606 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-1A0A075B606 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-1A0A075B606 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-1A0A075B606 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav13d-1A0A075B606 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.34□□□□□ -0.11
Trav13d-1A0A075B606 Gm10209-201ENSMUST00000203397 1607 ntBASIC14.33□□□□□ -0.11
Trav13d-1A0A075B606 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms