Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Gm6482-201ENSMUST00000168128 1410 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Gm7951-201ENSMUST00000171388 1408 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 AC166359.1-201ENSMUST00000220243 1871 ntBASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Dcpp3-201ENSMUST00000115428 610 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Gm13536-201ENSMUST00000132913 766 ntTSL 2 BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 A330094K24Rik-201ENSMUST00000180530 1027 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Mir6239-201ENSMUST00000183564 105 ntBASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Mir6366-201ENSMUST00000184472 82 ntBASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Gm21013-201ENSMUST00000184952 1201 ntBASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Gm33263-201ENSMUST00000220371 459 ntTSL 2 BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 AC154687.1-201ENSMUST00000224875 677 ntBASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Churc1-201ENSMUST00000041262 676 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Defb6-201ENSMUST00000063112 323 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Endov-201ENSMUST00000064513 954 ntTSL 5 BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 A430093F15Rik-201ENSMUST00000087947 985 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Acin1-201ENSMUST00000022793 4735 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Papolg-202ENSMUST00000102863 2171 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Tiprl-201ENSMUST00000043235 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Spata5-202ENSMUST00000108112 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 AC140299.1-201ENSMUST00000217855 1510 ntBASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Cd276-202ENSMUST00000165365 3603 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Elovl7-201ENSMUST00000022207 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Ebf3-205ENSMUST00000209578 1863 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Nifk-201ENSMUST00000027626 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Gorasp1-201ENSMUST00000035099 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Gm9466-201ENSMUST00000218144 2246 ntBASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
Pcdh15Q99PJ1 Fubp1-220ENSMUST00000200524 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 AC117245.3-201ENSMUST00000217495 2176 ntBASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Ces5a-201ENSMUST00000077816 1728 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Nlrc5-202ENSMUST00000098489 1721 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Gm43593-201ENSMUST00000198605 1346 ntBASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Prpf40b-202ENSMUST00000118287 3129 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Defb20-201ENSMUST00000109836 690 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Gm14083-201ENSMUST00000117873 620 ntBASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Fthl17-ps1-201ENSMUST00000120058 516 ntBASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Rps10-ps4-201ENSMUST00000120308 492 ntBASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Gm28199-201ENSMUST00000187127 619 ntTSL 3 BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Nuf2-203ENSMUST00000192248 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Gm43809-201ENSMUST00000200694 338 ntTSL 3 BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Gm45584-201ENSMUST00000211586 1143 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Cx3cl1-206ENSMUST00000211956 470 ntTSL 2 BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 AC144461.2-201ENSMUST00000218219 303 ntBASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Gm12691-202ENSMUST00000222516 918 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 AC134869.4-201ENSMUST00000224724 609 ntBASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 AC124426.1-201ENSMUST00000220871 2707 ntTSL 2 BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Sntg1-202ENSMUST00000115488 1554 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Vwa1-201ENSMUST00000042196 3623 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 1810059H22Rik-201ENSMUST00000203249 1526 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Slc28a1-202ENSMUST00000119083 2899 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Wdr59-202ENSMUST00000038193 5083 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Cep76-201ENSMUST00000097542 3979 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Nrap-203ENSMUST00000095947 5214 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Gm37521-201ENSMUST00000193177 2045 ntBASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Sox9-201ENSMUST00000000579 4135 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Tmem267-204ENSMUST00000178948 1648 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Gm12269-201ENSMUST00000122273 717 ntBASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Prss28-201ENSMUST00000015267 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 A530032D15Rik-203ENSMUST00000161724 789 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Gm7545-201ENSMUST00000182773 1008 ntBASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 AC164612.2-201ENSMUST00000215737 719 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 AC160991.1-201ENSMUST00000224924 753 ntBASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 AC140406.3-201ENSMUST00000227619 478 ntBASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Clrn2-201ENSMUST00000053250 944 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 n-R5s74-201ENSMUST00000082654 116 ntBASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Speer4c-201ENSMUST00000095005 1159 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Speer4d-201ENSMUST00000095006 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Atxn7l1-204ENSMUST00000125192 2644 ntAPPRIS ALT2 TSL 5 BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Spats2l-201ENSMUST00000163239 2313 ntTSL 5 BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Mthfd1l-202ENSMUST00000117291 3669 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Ccdc38-201ENSMUST00000092215 3656 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Cycs-202ENSMUST00000161401 3123 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
Pcdh15Q99PJ1 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 AI464131-201ENSMUST00000054920 4173 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Hpx-201ENSMUST00000033185 1499 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Hyal1-202ENSMUST00000112387 2706 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Gabrr3-201ENSMUST00000114341 1656 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Hsd11b1-205ENSMUST00000161737 1355 ntAPPRIS P2 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Zfp983-201ENSMUST00000039726 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Gm20755-201ENSMUST00000196893 1827 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Trappc5-202ENSMUST00000207787 4411 ntAPPRIS P1 BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Plscr4-201ENSMUST00000034941 3204 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Pcdh15Q99PJ1 Lsamp-201ENSMUST00000078873 2951 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 76,532 protein–RNA pairs in 42.8 ms