Protein–RNA interactions for Protein: Q9JLR1

Sec61a2, Protein transport protein Sec61 subunit alpha isoform 2, mousemouse

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61a2Q9JLR1 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61a2Q9JLR1 Pcdh15-229ENSMUST00000155701 2754 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61a2Q9JLR1 Lpxn-201ENSMUST00000025601 1675 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61a2Q9JLR1 5830462I19Rik-201ENSMUST00000168137 3383 ntBASIC9.25□□□□□ -0.93
Sec61a2Q9JLR1 1700047M11Rik-202ENSMUST00000189594 2607 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61a2Q9JLR1 Gmeb2-201ENSMUST00000049032 4121 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61a2Q9JLR1 Wwtr1-202ENSMUST00000120977 4533 ntAPPRIS ALT2 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61a2Q9JLR1 Smcr8-201ENSMUST00000056907 7391 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61a2Q9JLR1 Slc45a3-202ENSMUST00000177943 3212 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61a2Q9JLR1 Zfp658-201ENSMUST00000005597 2664 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61a2Q9JLR1 Ptk2b-201ENSMUST00000022622 4034 ntAPPRIS P1 TSL 5 BASIC9.25□□□□□ -0.93
Sec61a2Q9JLR1 Cd163-201ENSMUST00000032234 4404 ntAPPRIS P3 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61a2Q9JLR1 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61a2Q9JLR1 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC9.25□□□□□ -0.93
Sec61a2Q9JLR1 Carmil1-202ENSMUST00000110398 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Cyp7b1-201ENSMUST00000035625 2166 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Speer4b-201ENSMUST00000053257 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Cr1l-204ENSMUST00000193094 2776 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 A1cf-201ENSMUST00000075838 2989 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Smg7-202ENSMUST00000073441 5767 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Zfp710-203ENSMUST00000166250 3606 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Hist4h4-201ENSMUST00000179285 2863 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Tomm40l-201ENSMUST00000005817 4712 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Zfp775-203ENSMUST00000204095 4143 ntAPPRIS P1 TSL 2 BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Llph-201ENSMUST00000020444 1664 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Gm21969-201ENSMUST00000178644 4402 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Tbck-202ENSMUST00000169172 6578 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Gm22937-201ENSMUST00000103954 131 ntBASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Meig1-202ENSMUST00000115081 421 ntAPPRIS P1 TSL 5 BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Gm14993-201ENSMUST00000121180 164 ntBASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Txnrd2-205ENSMUST00000126778 491 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Kdm6bos-201ENSMUST00000129924 840 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Gm11884-201ENSMUST00000131639 641 ntTSL 5 BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Gm11670-201ENSMUST00000143435 511 ntTSL 2 BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Gm12069-201ENSMUST00000145127 806 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Gm12426-201ENSMUST00000153083 371 ntTSL 5 BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Gm25661-201ENSMUST00000157704 296 ntBASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 0610040B10Rik-202ENSMUST00000162890 600 ntTSL 5 BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Nudt12-203ENSMUST00000174122 1244 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Gm26272-201ENSMUST00000179241 132 ntBASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Mir6941-201ENSMUST00000184711 59 ntBASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Ighv5-8-202ENSMUST00000191967 337 ntBASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Gm37083-201ENSMUST00000195784 711 ntTSL 2 BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Gm43564-201ENSMUST00000196185 211 ntBASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Gm6069-201ENSMUST00000196501 463 ntBASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Gm44498-201ENSMUST00000199509 111 ntBASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Fkbp6-204ENSMUST00000201791 1297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Gm6352-201ENSMUST00000203583 1134 ntBASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 4930543N07Rik-202ENSMUST00000209503 1117 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 AC161172.1-201ENSMUST00000227801 486 ntBASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Tsga10ip-201ENSMUST00000044527 487 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Tceal9-201ENSMUST00000048687 1019 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Gemin6-201ENSMUST00000069486 1134 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Vmn1r44-201ENSMUST00000089420 1108 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Hcar2-201ENSMUST00000057145 1930 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Fyco1-201ENSMUST00000084715 7949 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Zfp317-205ENSMUST00000215372 2809 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Eif2ak4-201ENSMUST00000005233 5212 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Tnik-201ENSMUST00000159236 12276 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Celf5-202ENSMUST00000119060 4166 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Idua-201ENSMUST00000071650 3536 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Tesk2-202ENSMUST00000106456 2430 ntTSL 5 BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Mpo-203ENSMUST00000121303 2409 ntAPPRIS P1 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Fcgr3-204ENSMUST00000169017 1324 ntAPPRIS ALT2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Rnf123-207ENSMUST00000160249 4426 ntAPPRIS P3 TSL 5 BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Gm10031-201ENSMUST00000190422 2653 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Gm15943-201ENSMUST00000147638 3821 ntTSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Rpap2-201ENSMUST00000065422 2268 ntAPPRIS P3 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 Henmt1-203ENSMUST00000106586 1838 ntAPPRIS P2 TSL 1 (best) BASIC9.24□□□□□ -0.93
Sec61a2Q9JLR1 St5-204ENSMUST00000168005 3004 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Nup133-201ENSMUST00000044795 5808 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Sbno2-201ENSMUST00000042771 4227 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Plekhb2-203ENSMUST00000156687 5176 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Stk36-201ENSMUST00000087183 5245 ntAPPRIS P1 TSL 5 BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Cngb1-204ENSMUST00000121162 3336 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Tnfaip8-212ENSMUST00000179937 2385 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Rbm10-204ENSMUST00000115374 3564 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Slc19a1-208ENSMUST00000136925 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Lhfpl2-201ENSMUST00000054274 4348 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Slc12a6-204ENSMUST00000110991 4556 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Gm364-201ENSMUST00000114725 2156 ntAPPRIS P1 TSL 2 BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Cherp-207ENSMUST00000212991 3646 ntAPPRIS P2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Adamts4-202ENSMUST00000111315 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Aoc1-201ENSMUST00000031835 2675 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Agbl5-201ENSMUST00000069705 2922 ntAPPRIS P3 TSL 1 (best) BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 5031425E22Rik-202ENSMUST00000185943 1477 ntTSL 5 BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Klf8-201ENSMUST00000039545 4407 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Gm5641-201ENSMUST00000091130 1488 ntBASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Eif2ak4-203ENSMUST00000110869 1715 ntTSL 1 (best) BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Cct8l1-201ENSMUST00000045016 1961 ntAPPRIS P1 BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Rxfp2-202ENSMUST00000110496 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC9.23□□□□□ -0.93
Sec61a2Q9JLR1 Nectin4-203ENSMUST00000111286 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.23□□□□□ -0.93
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms