Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 Mx2-201ENSMUST00000024112 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp54Q8BL06 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp54Q8BL06 Cdh15-201ENSMUST00000034443 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp54Q8BL06 Ampd3-206ENSMUST00000170374 3489 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp54Q8BL06 Sema4c-202ENSMUST00000191642 3892 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Usp54Q8BL06 Gm14326-203ENSMUST00000108932 888 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp54Q8BL06 Gm12248-201ENSMUST00000137124 933 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Usp54Q8BL06 Gm12962-201ENSMUST00000138697 580 ntTSL 2 BASIC14.35□□□□□ -0.11
Usp54Q8BL06 Ggta1-209ENSMUST00000164889 1185 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Usp54Q8BL06 Vmn2r-ps7-201ENSMUST00000176244 1098 ntBASIC14.35□□□□□ -0.11
Usp54Q8BL06 Pantr1-211ENSMUST00000186656 647 ntTSL 3 BASIC14.35□□□□□ -0.11
Usp54Q8BL06 1810007D17Rik-201ENSMUST00000187629 742 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp54Q8BL06 Gm29572-201ENSMUST00000190305 283 ntTSL 5 BASIC14.35□□□□□ -0.11
Usp54Q8BL06 AC107369.2-201ENSMUST00000226154 916 ntBASIC14.35□□□□□ -0.11
Usp54Q8BL06 Inpp4a-202ENSMUST00000058307 2963 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp54Q8BL06 Map2k7-204ENSMUST00000110995 1558 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp54Q8BL06 Hmbox1-209ENSMUST00000176832 1586 ntTSL 5 BASIC14.35□□□□□ -0.11
Usp54Q8BL06 Ido1-201ENSMUST00000033956 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp54Q8BL06 Bzw1-201ENSMUST00000050552 3876 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp54Q8BL06 Acot9-201ENSMUST00000026324 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp54Q8BL06 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp54Q8BL06 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp54Q8BL06 D630003M21Rik-203ENSMUST00000169335 3457 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Usp54Q8BL06 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Usp54Q8BL06 Hdac9-203ENSMUST00000209667 1635 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp54Q8BL06 Gm16287-201ENSMUST00000097827 2324 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Usp54Q8BL06 Slc16a1-201ENSMUST00000046212 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Usp54Q8BL06 Gm18345-201ENSMUST00000200710 1390 ntBASIC14.34□□□□□ -0.11
Usp54Q8BL06 Gm12452-201ENSMUST00000117128 331 ntBASIC14.34□□□□□ -0.11
Usp54Q8BL06 Fank1-202ENSMUST00000121560 475 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp54Q8BL06 A930019D19Rik-201ENSMUST00000135360 958 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp54Q8BL06 Gm8379-201ENSMUST00000165448 1192 ntBASIC14.34□□□□□ -0.11
Usp54Q8BL06 Gm2907-201ENSMUST00000181256 1192 ntBASIC14.34□□□□□ -0.11
Usp54Q8BL06 Gm7210-201ENSMUST00000209309 1067 ntBASIC14.34□□□□□ -0.11
Usp54Q8BL06 Gm46391-201ENSMUST00000220704 203 ntBASIC14.34□□□□□ -0.11
Usp54Q8BL06 Olfr1513-201ENSMUST00000089739 942 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Usp54Q8BL06 Ints6l-207ENSMUST00000186445 3608 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Usp54Q8BL06 Mier1-205ENSMUST00000106858 4830 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp54Q8BL06 Opalin-201ENSMUST00000087176 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp54Q8BL06 Rubcn-203ENSMUST00000115105 5255 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Usp54Q8BL06 Sorbs2-228ENSMUST00000153798 2667 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp54Q8BL06 Tefm-201ENSMUST00000050207 1309 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp54Q8BL06 Nsg2-202ENSMUST00000093219 1974 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp54Q8BL06 Pm20d1-201ENSMUST00000048660 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp54Q8BL06 Sppl2c-202ENSMUST00000107000 2225 ntAPPRIS P4 BASIC14.34□□□□□ -0.11
Usp54Q8BL06 Dhx57-202ENSMUST00000086555 5077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp54Q8BL06 Gm1979-201ENSMUST00000168875 2025 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Usp54Q8BL06 Nap1l2-201ENSMUST00000121720 2465 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Usp54Q8BL06 Rasgrp1-203ENSMUST00000172901 1903 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp54Q8BL06 Eif2b3-201ENSMUST00000070610 1369 ntTSL 5 BASIC14.34□□□□□ -0.11
Usp54Q8BL06 Tns1-209ENSMUST00000187691 2813 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp54Q8BL06 Mir704-201ENSMUST00000102106 77 ntBASIC14.34□□□□□ -0.11
Usp54Q8BL06 E030025P04Rik-201ENSMUST00000106710 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp54Q8BL06 9230117E06Rik-201ENSMUST00000159309 497 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Usp54Q8BL06 Mir378b-201ENSMUST00000175244 92 ntBASIC14.34□□□□□ -0.11
Usp54Q8BL06 Igkv4-62-201ENSMUST00000177795 288 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Usp54Q8BL06 AC154669.1-201ENSMUST00000224405 482 ntBASIC14.34□□□□□ -0.11
Usp54Q8BL06 AC156561.1-201ENSMUST00000224774 233 ntBASIC14.34□□□□□ -0.11
Usp54Q8BL06 Ctsw-201ENSMUST00000025844 1232 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp54Q8BL06 Defb6-201ENSMUST00000063112 323 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Usp54Q8BL06 Mir195a-201ENSMUST00000083477 94 ntBASIC14.34□□□□□ -0.11
Usp54Q8BL06 Gm14735-201ENSMUST00000121772 3088 ntBASIC14.34□□□□□ -0.11
Usp54Q8BL06 Zc3h4-202ENSMUST00000209289 5853 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Usp54Q8BL06 Ccdc62-201ENSMUST00000094320 3924 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Usp54Q8BL06 Mipol1-205ENSMUST00000145003 1424 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp54Q8BL06 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp54Q8BL06 Fmo4-201ENSMUST00000028014 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Usp54Q8BL06 Tpmt-201ENSMUST00000021806 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp54Q8BL06 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp54Q8BL06 Sav1-201ENSMUST00000021467 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp54Q8BL06 Cep112-213ENSMUST00000150863 3453 ntTSL 5 BASIC14.33□□□□□ -0.12
Usp54Q8BL06 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp54Q8BL06 Pcdh15-229ENSMUST00000155701 2754 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp54Q8BL06 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp54Q8BL06 Ncstn-201ENSMUST00000003550 2901 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp54Q8BL06 Als2cl-201ENSMUST00000084926 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp54Q8BL06 C130021I20Rik-201ENSMUST00000147294 3693 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp54Q8BL06 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp54Q8BL06 Gm12037-201ENSMUST00000123160 308 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp54Q8BL06 Tmbim6-205ENSMUST00000160635 871 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Usp54Q8BL06 Zfp419-201ENSMUST00000173446 916 ntBASIC14.33□□□□□ -0.12
Usp54Q8BL06 Gm38320-201ENSMUST00000192767 1281 ntBASIC14.33□□□□□ -0.12
Usp54Q8BL06 Olfr1419-201ENSMUST00000087857 1160 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
Usp54Q8BL06 Nf2-202ENSMUST00000056290 2394 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp54Q8BL06 Ppef2-202ENSMUST00000201130 2878 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp54Q8BL06 Cd200r2-201ENSMUST00000102805 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp54Q8BL06 Sfmbt2-203ENSMUST00000114862 1763 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp54Q8BL06 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp54Q8BL06 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Usp54Q8BL06 Gabrr3-201ENSMUST00000114341 1656 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp54Q8BL06 Gm26527-201ENSMUST00000180416 1948 ntTSL 5 BASIC14.33□□□□□ -0.12
Usp54Q8BL06 Cc2d1a-201ENSMUST00000040383 3471 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Usp54Q8BL06 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Usp54Q8BL06 Stat3-203ENSMUST00000127638 4516 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp54Q8BL06 Fosb-205ENSMUST00000208326 3654 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp54Q8BL06 Chmp3-201ENSMUST00000059462 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Usp54Q8BL06 Ap3m1-201ENSMUST00000022371 1770 ntTSL 5 BASIC14.32□□□□□ -0.12
Usp54Q8BL06 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Usp54Q8BL06 Itgal-205ENSMUST00000170971 3662 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Usp54Q8BL06 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms