Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm10701-201ENSMUST00000098926 906 ntTSL 2 BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Grk3-204ENSMUST00000197888 1938 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Ndufs1-203ENSMUST00000168099 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Anxa7-202ENSMUST00000100844 2904 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 AU019990-202ENSMUST00000143964 1614 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Otof-202ENSMUST00000114747 6881 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Gm38199-201ENSMUST00000192013 3277 ntBASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Sgk3-204ENSMUST00000171265 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Gm45895-201ENSMUST00000212248 1697 ntTSL 5 BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Zfp804b-202ENSMUST00000200317 4430 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Fcrla-203ENSMUST00000159171 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Vwa3b-205ENSMUST00000162449 1360 ntAPPRIS P5 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 D030068K23Rik-203ENSMUST00000181098 1399 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Nfkbiz-201ENSMUST00000036273 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Brpf1-208ENSMUST00000203577 4468 ntTSL 5 BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Blnk-202ENSMUST00000117695 1701 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Gm31138-201ENSMUST00000212296 1705 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Sdhc-202ENSMUST00000111336 3171 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Gm5878-201ENSMUST00000113802 4643 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Fbxo40-202ENSMUST00000114806 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Ptpn7-201ENSMUST00000049449 3261 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Vps54Q5SPW0 Olfr582-203ENSMUST00000211036 1849 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Vps54Q5SPW0 Tbce-201ENSMUST00000039894 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps54Q5SPW0 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps54Q5SPW0 Pcdh15-221ENSMUST00000146682 1891 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Vps54Q5SPW0 Gemin8-201ENSMUST00000056410 1862 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps54Q5SPW0 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps54Q5SPW0 Pcgf5-202ENSMUST00000071267 1508 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Vps54Q5SPW0 Ankrd26-201ENSMUST00000112830 6930 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.44
Vps54Q5SPW0 Prmt7-201ENSMUST00000071592 3472 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps54Q5SPW0 Gm20735-201ENSMUST00000212077 1979 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Vps54Q5SPW0 Fam83c-201ENSMUST00000029143 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps54Q5SPW0 Mgme1-201ENSMUST00000028910 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Vps54Q5SPW0 Gm44907-201ENSMUST00000207423 1633 ntBASIC12.27□□□□□ -0.44
Vps54Q5SPW0 Chad-201ENSMUST00000040418 1680 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Vps33a-201ENSMUST00000031388 4235 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Gm6755-201ENSMUST00000100598 864 ntBASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Gm6740-201ENSMUST00000100617 864 ntBASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Gm12420-201ENSMUST00000119869 1048 ntBASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Slc2a4rg-ps-201ENSMUST00000127559 2976 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Osgep-207ENSMUST00000162177 1219 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Pik3r4-206ENSMUST00000188784 1295 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Gm29487-201ENSMUST00000190146 256 ntBASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Gm37921-201ENSMUST00000194333 695 ntBASIC12.27□□□□□ -0.45
Vps54Q5SPW0 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Gm6342-201ENSMUST00000204344 766 ntBASIC12.27□□□□□ -0.45
Vps54Q5SPW0 C230062I16Rik-203ENSMUST00000208015 648 ntTSL 3 BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Gm46329-201ENSMUST00000218373 609 ntTSL 5 BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 AC122824.1-201ENSMUST00000221705 828 ntTSL 3 BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 AC161877.1-201ENSMUST00000227736 699 ntBASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Olfr985-201ENSMUST00000060345 1116 ntAPPRIS P1 BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Tacc2-205ENSMUST00000207282 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Eef2k-201ENSMUST00000047875 6580 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Zfp111-202ENSMUST00000073833 3079 ntAPPRIS P3 TSL 5 BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Rnf13-201ENSMUST00000041826 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Gm37333-201ENSMUST00000192904 2251 ntBASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Pde9a-206ENSMUST00000134525 1818 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Gm9260-201ENSMUST00000199781 1380 ntBASIC12.27□□□□□ -0.45
Vps54Q5SPW0 5330439K02Rik-201ENSMUST00000180953 2312 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Olfr55-202ENSMUST00000214888 4675 ntTSL 5 BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Dhx35-202ENSMUST00000109478 3284 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Gm40655-201ENSMUST00000220802 1880 ntTSL 5 BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Txlng-201ENSMUST00000041370 3862 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Bcl11a-204ENSMUST00000118955 1505 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 4930429F24Rik-201ENSMUST00000151676 1520 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Vps54Q5SPW0 Myh10-203ENSMUST00000102611 7791 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Gal3st4-201ENSMUST00000100530 3162 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Atcay-201ENSMUST00000047408 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Zcchc4-201ENSMUST00000031077 5743 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Smok3a-202ENSMUST00000171498 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Ifi211-201ENSMUST00000009340 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Zscan21-203ENSMUST00000110959 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Wdr19-204ENSMUST00000203653 6279 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Ighv1-74-201ENSMUST00000103543 348 ntAPPRIS ALT2 BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Gm12168-201ENSMUST00000119051 368 ntBASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 CT025642.1-201ENSMUST00000224734 1219 ntBASIC12.26□□□□□ -0.45
Vps54Q5SPW0 4930596D02Rik-201ENSMUST00000043266 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Olfr1417-201ENSMUST00000061235 948 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Fam186a-201ENSMUST00000062631 759 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Gm5148-201ENSMUST00000079755 1265 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Nutf2-ps1-201ENSMUST00000095978 864 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Grxcr2-201ENSMUST00000097591 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Plscr2-205ENSMUST00000180154 1900 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Tro-202ENSMUST00000087258 6559 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Ctsll3-201ENSMUST00000043754 1337 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Herc6-201ENSMUST00000031817 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Pibf1-201ENSMUST00000022650 2797 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Ispd-206ENSMUST00000223068 2808 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Ccdc130-201ENSMUST00000005120 1441 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Camk1d-201ENSMUST00000044009 6962 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Gm44888-201ENSMUST00000209119 2541 ntBASIC12.26□□□□□ -0.45
Vps54Q5SPW0 Icam1-201ENSMUST00000086399 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms