Protein–RNA interactions for Protein: Q04886

Sox8, Transcription factor SOX-8, mousemouse

Predictions only

Length 464 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox8Q04886 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox8Q04886 E2f7-204ENSMUST00000173471 3567 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox8Q04886 Blk-201ENSMUST00000014597 2326 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox8Q04886 Fcrla-203ENSMUST00000159171 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox8Q04886 D030068K23Rik-203ENSMUST00000181098 1399 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox8Q04886 Disp1-201ENSMUST00000003035 4984 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox8Q04886 Gpatch1-201ENSMUST00000079693 3065 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox8Q04886 Sec31b-201ENSMUST00000063632 3939 ntAPPRIS P1 TSL 5 BASIC10.83□□□□□ -0.68
Sox8Q04886 Trav10d-201ENSMUST00000103646 406 ntAPPRIS P1 BASIC10.83□□□□□ -0.68
Sox8Q04886 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox8Q04886 Gm13002-201ENSMUST00000119286 682 ntBASIC10.83□□□□□ -0.68
Sox8Q04886 Gm9166-201ENSMUST00000120293 561 ntBASIC10.83□□□□□ -0.68
Sox8Q04886 6430531B16Rik-202ENSMUST00000121412 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox8Q04886 4930529I22Rik-201ENSMUST00000131509 589 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox8Q04886 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox8Q04886 Gm3687-201ENSMUST00000161710 460 ntBASIC10.83□□□□□ -0.68
Sox8Q04886 9230114K14Rik-202ENSMUST00000198720 837 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox8Q04886 Ckb-ps2-201ENSMUST00000198886 1001 ntBASIC10.83□□□□□ -0.68
Sox8Q04886 Gm45846-201ENSMUST00000211170 446 ntTSL 2 BASIC10.83□□□□□ -0.68
Sox8Q04886 Gm46329-201ENSMUST00000218373 609 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox8Q04886 Gm29689-201ENSMUST00000221076 589 ntBASIC10.83□□□□□ -0.68
Sox8Q04886 AC159261.1-201ENSMUST00000222493 911 ntTSL 2 BASIC10.83□□□□□ -0.68
Sox8Q04886 Cma1-202ENSMUST00000226280 1090 ntAPPRIS ALT2 BASIC10.83□□□□□ -0.68
Sox8Q04886 AC161877.1-201ENSMUST00000227736 699 ntBASIC10.83□□□□□ -0.68
Sox8Q04886 Cma1-201ENSMUST00000022834 1074 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox8Q04886 Tmem89-201ENSMUST00000026744 538 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox8Q04886 AU016765-201ENSMUST00000097295 946 ntTSL 2 BASIC10.83□□□□□ -0.68
Sox8Q04886 Bace2-201ENSMUST00000047275 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox8Q04886 Zfp36-201ENSMUST00000051241 2790 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox8Q04886 Add2-204ENSMUST00000203366 3407 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sox8Q04886 Mecom-202ENSMUST00000108270 5692 ntAPPRIS ALT2 TSL 5 BASIC10.83□□□□□ -0.68
Sox8Q04886 Gfi1b-204ENSMUST00000164290 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox8Q04886 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox8Q04886 Myo1c-203ENSMUST00000102505 4652 ntAPPRIS ALT1 TSL 5 BASIC10.83□□□□□ -0.68
Sox8Q04886 Spata7-202ENSMUST00000101144 1541 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
Sox8Q04886 Efna1-203ENSMUST00000118860 1403 ntTSL 5 BASIC10.83□□□□□ -0.68
Sox8Q04886 Rbm47-202ENSMUST00000094757 4643 ntAPPRIS P3 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox8Q04886 Acsl6-203ENSMUST00000072178 2432 ntAPPRIS P5 TSL 5 BASIC10.83□□□□□ -0.68
Sox8Q04886 Cyp2b13-201ENSMUST00000005669 1875 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
Sox8Q04886 Adra1a-205ENSMUST00000161339 2788 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 Gtf2h3-201ENSMUST00000031333 2672 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 Bfar-201ENSMUST00000023365 3003 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 Tmbim7-201ENSMUST00000014673 1552 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 Cnga4-201ENSMUST00000033187 2484 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 Gtf2i-222ENSMUST00000174354 4084 ntAPPRIS ALT2 TSL 2 BASIC10.82□□□□□ -0.68
Sox8Q04886 AC159810.1-201ENSMUST00000214838 1480 ntBASIC10.82□□□□□ -0.68
Sox8Q04886 Gm8446-201ENSMUST00000188834 2712 ntBASIC10.82□□□□□ -0.68
Sox8Q04886 Arc-202ENSMUST00000110009 3054 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 Arc-201ENSMUST00000023268 3055 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 Vgll3-202ENSMUST00000227997 1383 ntBASIC10.82□□□□□ -0.68
Sox8Q04886 Dld-201ENSMUST00000110857 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 Bloc1s5-201ENSMUST00000035899 5634 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 Gm11569-201ENSMUST00000105057 869 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sox8Q04886 Rplp1-ps1-201ENSMUST00000119410 345 ntBASIC10.82□□□□□ -0.68
Sox8Q04886 Gm12420-201ENSMUST00000119869 1048 ntBASIC10.82□□□□□ -0.68
Sox8Q04886 Gm6939-201ENSMUST00000122029 864 ntBASIC10.82□□□□□ -0.68
Sox8Q04886 Gm15472-201ENSMUST00000141652 847 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox8Q04886 Gm26356-201ENSMUST00000158217 283 ntBASIC10.82□□□□□ -0.68
Sox8Q04886 Gm3298-202ENSMUST00000172110 615 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox8Q04886 Gm20455-201ENSMUST00000174100 1138 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 Gm2345-201ENSMUST00000193451 589 ntBASIC10.82□□□□□ -0.68
Sox8Q04886 Gm17936-201ENSMUST00000199413 988 ntBASIC10.82□□□□□ -0.68
Sox8Q04886 Gm29918-201ENSMUST00000205635 138 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox8Q04886 Acsm5-204ENSMUST00000207387 1130 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 Thyn1-202ENSMUST00000213683 1107 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Sox8Q04886 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC10.82□□□□□ -0.68
Sox8Q04886 AC130217.1-201ENSMUST00000224146 909 ntBASIC10.82□□□□□ -0.68
Sox8Q04886 Gm43305-202ENSMUST00000225083 705 ntBASIC10.82□□□□□ -0.68
Sox8Q04886 CT030135.2-201ENSMUST00000225255 893 ntBASIC10.82□□□□□ -0.68
Sox8Q04886 AC118639.1-202ENSMUST00000226957 653 ntBASIC10.82□□□□□ -0.68
Sox8Q04886 AC102523.2-201ENSMUST00000227813 983 ntBASIC10.82□□□□□ -0.68
Sox8Q04886 Olfr642-201ENSMUST00000052660 945 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
Sox8Q04886 Gm4883-201ENSMUST00000085702 528 ntBASIC10.82□□□□□ -0.68
Sox8Q04886 Gm4778-201ENSMUST00000098878 1098 ntBASIC10.82□□□□□ -0.68
Sox8Q04886 Dctn1-203ENSMUST00000113913 4163 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 Uroc1-201ENSMUST00000046128 3370 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 Tor4a-201ENSMUST00000081869 3255 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 Trpc6-202ENSMUST00000214596 2913 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 Ptpre-205ENSMUST00000210833 2209 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 Tcaf1-202ENSMUST00000045140 5256 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 Nrap-204ENSMUST00000166203 5079 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
Sox8Q04886 Msln-201ENSMUST00000075884 2114 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 Uhrf1-202ENSMUST00000113035 3402 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 Gm5174-201ENSMUST00000171131 1423 ntBASIC10.82□□□□□ -0.68
Sox8Q04886 Pear1-201ENSMUST00000029714 4260 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
Sox8Q04886 Rnf40-201ENSMUST00000033088 3906 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox8Q04886 Gm45895-201ENSMUST00000212248 1697 ntTSL 5 BASIC10.82□□□□□ -0.68
Sox8Q04886 Prmt7-201ENSMUST00000071592 3472 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 Cd247-202ENSMUST00000027849 1317 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 9030624J02Rik-202ENSMUST00000059390 5097 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
Sox8Q04886 Wdr25-201ENSMUST00000047115 4356 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox8Q04886 AC154171.2-201ENSMUST00000225219 2652 ntBASIC10.81□□□□□ -0.68
Sox8Q04886 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox8Q04886 Drc3-201ENSMUST00000070805 2061 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox8Q04886 Ccdc87-201ENSMUST00000088653 3163 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
Sox8Q04886 Ces1a-201ENSMUST00000095211 1980 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Sox8Q04886 Rfx6-202ENSMUST00000122922 3464 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
Sox8Q04886 Myo9a-203ENSMUST00000128341 11985 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
Retrieved 100 of 76,532 protein–RNA pairs in 54.4 ms