Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 AC118476.4-201ENSMUST00000215385 790 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp54Q8BL06 AC122357.1-202ENSMUST00000221436 633 ntTSL 2 BASIC14.41□□□□□ -0.1
Usp54Q8BL06 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp54Q8BL06 Pla1a-201ENSMUST00000002926 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp54Q8BL06 Aldh3a1-202ENSMUST00000108716 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp54Q8BL06 Sult6b2-201ENSMUST00000111768 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp54Q8BL06 Grik4-202ENSMUST00000114865 5887 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp54Q8BL06 Crx-201ENSMUST00000044434 2919 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp54Q8BL06 Baiap3-202ENSMUST00000182056 4645 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp54Q8BL06 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp54Q8BL06 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp54Q8BL06 Trim13-202ENSMUST00000165015 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp54Q8BL06 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC14.41□□□□□ -0.1
Usp54Q8BL06 Atp1a3-205ENSMUST00000196684 3642 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Usp54Q8BL06 H2-T24-201ENSMUST00000113760 2182 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Usp54Q8BL06 AC117245.3-201ENSMUST00000217495 2176 ntBASIC14.4□□□□□ -0.1
Usp54Q8BL06 Sell-201ENSMUST00000027871 2199 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Hk3-201ENSMUST00000052949 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Tbc1d14-202ENSMUST00000124036 2765 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Mrps18b-202ENSMUST00000113782 803 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Gm12338-201ENSMUST00000122170 192 ntBASIC14.4□□□□□ -0.1
Usp54Q8BL06 Gm13685-201ENSMUST00000122462 141 ntBASIC14.4□□□□□ -0.1
Usp54Q8BL06 Gm15749-201ENSMUST00000161848 612 ntTSL 2 BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Mir3060-201ENSMUST00000175339 83 ntBASIC14.4□□□□□ -0.1
Usp54Q8BL06 Gm25687-201ENSMUST00000175442 241 ntBASIC14.4□□□□□ -0.1
Usp54Q8BL06 Gm21370-201ENSMUST00000177659 573 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Gm21188-201ENSMUST00000178618 573 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Gm22347-201ENSMUST00000180276 132 ntBASIC14.4□□□□□ -0.1
Usp54Q8BL06 Tac1-205ENSMUST00000185187 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Gm7160-201ENSMUST00000185535 471 ntTSL 2 BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Gm15860-203ENSMUST00000197262 360 ntTSL 3 BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Gm38839-201ENSMUST00000203833 633 ntTSL 2 BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Gm28053-203ENSMUST00000204408 351 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Usp54Q8BL06 6430531B16Rik-205ENSMUST00000210254 952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Gm32567-201ENSMUST00000211244 682 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp54Q8BL06 AC155929.2-201ENSMUST00000218541 307 ntBASIC14.4□□□□□ -0.1
Usp54Q8BL06 1810011H11Rik-202ENSMUST00000227060 496 ntBASIC14.4□□□□□ -0.1
Usp54Q8BL06 Sell-202ENSMUST00000097491 1215 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Gm26640-201ENSMUST00000180809 3524 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Eda2r-202ENSMUST00000113832 1433 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Cdkl2-201ENSMUST00000069937 3976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Tmigd1-201ENSMUST00000072633 1366 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Rsph14-203ENSMUST00000159994 1728 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Irak4-202ENSMUST00000109248 3437 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp54Q8BL06 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Scaf1-206ENSMUST00000211735 4209 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Gm24556-201ENSMUST00000104547 130 ntBASIC14.39□□□□□ -0.11
Usp54Q8BL06 Gimap4-203ENSMUST00000118802 771 ntTSL 3 BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Gm12376-201ENSMUST00000120538 607 ntBASIC14.39□□□□□ -0.11
Usp54Q8BL06 Gm16304-201ENSMUST00000129972 775 ntBASIC14.39□□□□□ -0.11
Usp54Q8BL06 E330010L02Rik-201ENSMUST00000136639 966 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Gm12364-201ENSMUST00000144419 547 ntTSL 3 BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Gm15221-201ENSMUST00000144439 414 ntTSL 3 BASIC14.39□□□□□ -0.11
Usp54Q8BL06 1010001N08Rik-202ENSMUST00000181316 728 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Mir6354-201ENSMUST00000184979 116 ntBASIC14.39□□□□□ -0.11
Usp54Q8BL06 Gm29372-201ENSMUST00000191416 364 ntBASIC14.39□□□□□ -0.11
Usp54Q8BL06 Ighv1-11-201ENSMUST00000191801 351 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Gm45126-201ENSMUST00000206702 960 ntBASIC14.39□□□□□ -0.11
Usp54Q8BL06 Gm44659-201ENSMUST00000207269 436 ntTSL 2 BASIC14.39□□□□□ -0.11
Usp54Q8BL06 2310034C09Rik-201ENSMUST00000089111 946 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Csl-201ENSMUST00000056085 1953 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Trmt12-201ENSMUST00000036937 4454 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC14.39□□□□□ -0.11
Usp54Q8BL06 AC090962.1-201ENSMUST00000226066 1799 ntBASIC14.39□□□□□ -0.11
Usp54Q8BL06 Gpcpd1-205ENSMUST00000110142 3703 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Mamdc2-201ENSMUST00000036069 3338 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Tom1l2-202ENSMUST00000093046 4849 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Ebf3-205ENSMUST00000209578 1863 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp54Q8BL06 AC238811.2-201ENSMUST00000224554 1509 ntBASIC14.39□□□□□ -0.11
Usp54Q8BL06 Zfp568-204ENSMUST00000177931 2013 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Rprd1b-203ENSMUST00000109518 4399 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Sh3tc2-201ENSMUST00000051720 4536 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Clec10a-202ENSMUST00000102571 1496 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Gm14504-201ENSMUST00000119391 1497 ntBASIC14.39□□□□□ -0.11
Usp54Q8BL06 Prdx1-204ENSMUST00000135573 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Acad8-201ENSMUST00000060513 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Ighv5-12-201ENSMUST00000103450 353 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Eif5a-204ENSMUST00000108607 852 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Alg13-203ENSMUST00000123710 604 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Gm12257-201ENSMUST00000148244 585 ntTSL 3 BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Gm15841-201ENSMUST00000160540 517 ntTSL 3 BASIC14.39□□□□□ -0.11
Usp54Q8BL06 H2-M5-203ENSMUST00000169189 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Gm42917-201ENSMUST00000200668 928 ntTSL 3 BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Gm35665-201ENSMUST00000206742 1140 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Gm3198-201ENSMUST00000208725 1026 ntBASIC14.39□□□□□ -0.11
Usp54Q8BL06 Gm19228-201ENSMUST00000214030 717 ntBASIC14.39□□□□□ -0.11
Usp54Q8BL06 Gm31497-201ENSMUST00000216981 638 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp54Q8BL06 9330159N22Rik-201ENSMUST00000221530 1031 ntBASIC14.39□□□□□ -0.11
Usp54Q8BL06 Spaca5-201ENSMUST00000040437 640 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Usp54Q8BL06 Taar3-201ENSMUST00000045152 1032 ntAPPRIS P1 BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms