Protein–RNA interactions for Protein: P43241

Cdx2, Homeobox protein CDX-2, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx2P43241 Lhx9-204ENSMUST00000112026 2065 ntAPPRIS P2 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Zscan5b-203ENSMUST00000165445 1407 ntAPPRIS P1 TSL 3 BASIC9.81□□□□□ -0.84
Cdx2P43241 Gm43585-201ENSMUST00000199375 1403 ntBASIC9.81□□□□□ -0.84
Cdx2P43241 Lao1-201ENSMUST00000058651 2349 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Gpr173-201ENSMUST00000070316 4855 ntAPPRIS P1 TSL 1 (best) BASIC9.81□□□□□ -0.84
Cdx2P43241 Cpt1c-201ENSMUST00000063761 2793 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Ppp4r1-204ENSMUST00000160664 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Plin4-201ENSMUST00000002908 5755 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Cdx2P43241 Myh4-201ENSMUST00000018632 6016 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Cdx2P43241 Med24-202ENSMUST00000100500 3133 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Cdx2P43241 Tmem47-201ENSMUST00000026760 4007 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Fermt3-201ENSMUST00000040772 2587 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Zfp654-202ENSMUST00000207826 6261 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Cdx2P43241 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Hvcn1-202ENSMUST00000100747 2805 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Kir3dl2-202ENSMUST00000113108 1932 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Tmub2-201ENSMUST00000036376 1939 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Cdadc1-208ENSMUST00000225839 3189 ntAPPRIS ALT2 BASIC9.8□□□□□ -0.84
Cdx2P43241 Plpbp-205ENSMUST00000209856 3954 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Gm26872-201ENSMUST00000180862 2261 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC9.8□□□□□ -0.84
Cdx2P43241 Sla2-202ENSMUST00000109561 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Hmg20a-205ENSMUST00000215269 1700 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Clgn-201ENSMUST00000002259 3902 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Pvalb-202ENSMUST00000120592 953 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Gm14138-201ENSMUST00000122061 745 ntBASIC9.8□□□□□ -0.84
Cdx2P43241 Rnasek-203ENSMUST00000141880 465 ntTSL 2 BASIC9.8□□□□□ -0.84
Cdx2P43241 Pdc-201ENSMUST00000165062 1246 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
Cdx2P43241 Plut-201ENSMUST00000172461 855 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 2410141K09Rik-204ENSMUST00000173583 515 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Mir3100-201ENSMUST00000174918 65 ntBASIC9.8□□□□□ -0.84
Cdx2P43241 Rbp2-204ENSMUST00000189446 803 ntAPPRIS P1 TSL 3 BASIC9.8□□□□□ -0.84
Cdx2P43241 Gm17815-201ENSMUST00000198305 895 ntBASIC9.8□□□□□ -0.84
Cdx2P43241 Cryab-205ENSMUST00000216755 836 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 CR974487.1-201ENSMUST00000220984 413 ntBASIC9.8□□□□□ -0.84
Cdx2P43241 CT025538.1-201ENSMUST00000223638 369 ntBASIC9.8□□□□□ -0.84
Cdx2P43241 AC156016.4-201ENSMUST00000227470 647 ntBASIC9.8□□□□□ -0.84
Cdx2P43241 Mettl7b-201ENSMUST00000026398 1230 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Crygc-201ENSMUST00000027089 783 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 n-R5s5-201ENSMUST00000083134 119 ntBASIC9.8□□□□□ -0.84
Cdx2P43241 3110001I22Rik-201ENSMUST00000035426 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Oplah-209ENSMUST00000171340 4085 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Cdx2P43241 Slc9a8-202ENSMUST00000073873 4429 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Cdx2P43241 Pik3cd-202ENSMUST00000105688 4335 ntAPPRIS ALT1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Nsd3-210ENSMUST00000153597 1865 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Gm38246-201ENSMUST00000194318 1511 ntBASIC9.8□□□□□ -0.84
Cdx2P43241 Slc6a18-201ENSMUST00000022105 2839 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Zswim9-201ENSMUST00000108532 3346 ntAPPRIS ALT2 TSL 5 BASIC9.8□□□□□ -0.84
Cdx2P43241 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Cdx2P43241 Hdac9-208ENSMUST00000211107 1683 ntTSL 5 BASIC9.8□□□□□ -0.84
Cdx2P43241 Abcg4-201ENSMUST00000034648 3476 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Prox1-203ENSMUST00000177288 3144 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
Cdx2P43241 Stat5a-201ENSMUST00000004145 3888 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
Cdx2P43241 Ttll7-203ENSMUST00000106134 2664 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Cdx2P43241 Iqsec1-201ENSMUST00000101151 6490 ntTSL 5 BASIC9.79□□□□□ -0.84
Cdx2P43241 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Slc45a3-201ENSMUST00000027695 3340 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Anxa11os-201ENSMUST00000184083 2479 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Gm17644-201ENSMUST00000181272 3200 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Trp63-207ENSMUST00000115308 2380 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Cdx2P43241 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Dsc2-201ENSMUST00000039247 4630 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Prpf40b-208ENSMUST00000136980 3047 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Cdx2P43241 Rdh13-201ENSMUST00000008579 3034 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Aar2-202ENSMUST00000109570 2766 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Gm26510-201ENSMUST00000180468 1796 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Flvcr2-201ENSMUST00000040461 3435 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Ece1-201ENSMUST00000102518 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Meaf6-205ENSMUST00000154689 4550 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Ifna6-201ENSMUST00000105146 570 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Cdx2P43241 0610037L13Rik-203ENSMUST00000106726 515 ntTSL 5 BASIC9.79□□□□□ -0.84
Cdx2P43241 Gm11947-201ENSMUST00000125275 273 ntTSL 3 BASIC9.79□□□□□ -0.84
Cdx2P43241 6330418K02Rik-202ENSMUST00000125662 1267 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 1700010K24Rik-201ENSMUST00000125852 226 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Slirp-202ENSMUST00000160488 802 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Ifna11-201ENSMUST00000170428 573 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Cdx2P43241 Siglech-208ENSMUST00000173835 833 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Pkib-204ENSMUST00000175852 731 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Gm16008-203ENSMUST00000181389 480 ntTSL 3 BASIC9.79□□□□□ -0.84
Cdx2P43241 Ighv5-10-201ENSMUST00000194591 252 ntBASIC9.79□□□□□ -0.84
Cdx2P43241 Gm38153-201ENSMUST00000195484 472 ntBASIC9.79□□□□□ -0.84
Cdx2P43241 Gm43833-201ENSMUST00000198828 293 ntBASIC9.79□□□□□ -0.84
Cdx2P43241 Gm44936-201ENSMUST00000207324 735 ntBASIC9.79□□□□□ -0.84
Cdx2P43241 Cryab-206ENSMUST00000217475 1117 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Gm28653-202ENSMUST00000227082 521 ntBASIC9.79□□□□□ -0.84
Cdx2P43241 Tsga8-201ENSMUST00000049420 1070 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Tcf21-201ENSMUST00000049930 1267 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 BC048562-201ENSMUST00000057265 690 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Ifna1-201ENSMUST00000094972 570 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
Cdx2P43241 Hap1-202ENSMUST00000138603 3316 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Cdx2P43241 Gm5432-201ENSMUST00000180759 1670 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Tcof1-204ENSMUST00000176630 4529 ntAPPRIS P3 TSL 5 BASIC9.79□□□□□ -0.84
Cdx2P43241 Gm4869-201ENSMUST00000197549 2955 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Cdx2P43241 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Cdx2P43241 Skp2-201ENSMUST00000096482 3118 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Retrieved 100 of 76,532 protein–RNA pairs in 64.4 ms