Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Rnf38-201ENSMUST00000045793 5012 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Spen-202ENSMUST00000105786 12299 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Pabpc4-203ENSMUST00000106241 3050 ntAPPRIS P5 TSL 5 BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Kcnh7-203ENSMUST00000112454 3073 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Abcf3-201ENSMUST00000003319 3090 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Rapgef6-203ENSMUST00000102743 8189 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Sptbn1-202ENSMUST00000011877 8238 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Vbp1-201ENSMUST00000033540 1595 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Ccnb1-201ENSMUST00000072119 2489 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Pdzk1-203ENSMUST00000107070 2711 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Rufy4-202ENSMUST00000127134 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 A1bg-201ENSMUST00000096418 1821 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Sec13-201ENSMUST00000032440 1353 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Gm37031-201ENSMUST00000195487 2530 ntBASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 1700017B05Rik-201ENSMUST00000034846 4152 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Pcdh19Q80TF3 Dedd-202ENSMUST00000097467 1606 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Srrt-201ENSMUST00000040873 3024 ntAPPRIS P3 TSL 5 BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Nhsl1-202ENSMUST00000100054 6795 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Bzw2-201ENSMUST00000020856 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Lct-201ENSMUST00000073490 6174 ntAPPRIS P1 TSL 2 BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Acan-201ENSMUST00000032835 7355 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Dcun1d2-204ENSMUST00000110840 2853 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Msh5-201ENSMUST00000007250 2886 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Ly6e-202ENSMUST00000169343 2154 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 D130019J16Rik-201ENSMUST00000193261 2158 ntBASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Tpd52-202ENSMUST00000091354 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Vipas39-203ENSMUST00000179379 2418 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Abi1-203ENSMUST00000093171 2411 ntAPPRIS ALT1 TSL 5 BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Ccpg1-201ENSMUST00000037977 3151 ntAPPRIS P3 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Gpcpd1-202ENSMUST00000060955 3686 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Gas7-202ENSMUST00000108680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Gstm4-203ENSMUST00000178808 1462 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Pfkfb3-215ENSMUST00000183869 1478 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Kalrn-205ENSMUST00000114953 4722 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Mobp-202ENSMUST00000093773 3286 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Isl1-201ENSMUST00000036060 2516 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Wnk1-204ENSMUST00000088646 8364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Gm22582-201ENSMUST00000102283 94 ntBASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Arpc3-202ENSMUST00000102525 899 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Ifna9-201ENSMUST00000102807 573 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Gm11235-201ENSMUST00000117763 333 ntBASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Gm15707-201ENSMUST00000118804 996 ntBASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Gm4943-201ENSMUST00000132879 424 ntBASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Gm12927-201ENSMUST00000150252 373 ntTSL 2 BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Stamos-201ENSMUST00000152524 801 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Mir1941-201ENSMUST00000157834 83 ntBASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Mrto4-ps2-201ENSMUST00000164169 549 ntBASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Gm24954-201ENSMUST00000178831 110 ntBASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Cpsf4l-201ENSMUST00000018871 1235 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Rnf212-202ENSMUST00000196652 853 ntTSL 2 BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Rhoc-205ENSMUST00000196817 877 ntAPPRIS P1 TSL 3 BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Olfr163-ps1-201ENSMUST00000205891 940 ntBASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Gm7238-201ENSMUST00000206467 973 ntBASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Gm45363-201ENSMUST00000210196 1294 ntBASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Madcam1-202ENSMUST00000217748 944 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Gm6331-201ENSMUST00000217890 450 ntBASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 AC153936.1-201ENSMUST00000219874 395 ntBASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 CT009713.1-201ENSMUST00000224828 853 ntBASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 AC134913.2-201ENSMUST00000225017 771 ntBASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Tex101-201ENSMUST00000078001 1059 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Gm22341-201ENSMUST00000083775 129 ntBASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Rcbtb2-223ENSMUST00000170677 3573 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Gm20089-201ENSMUST00000192391 2084 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Ncoa3-201ENSMUST00000088095 7531 ntAPPRIS P2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Vipr2-201ENSMUST00000011315 3383 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Klf8-201ENSMUST00000039545 4407 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Crybg3-205ENSMUST00000172910 2870 ntTSL 5 BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Mdh1-201ENSMUST00000102874 2122 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 D630029K05Rik-201ENSMUST00000033651 2133 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Nr5a1-201ENSMUST00000028084 2947 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Pou3f4-201ENSMUST00000078229 2928 ntAPPRIS P1 BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Vwa5b2-207ENSMUST00000159780 4042 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Tspan18-202ENSMUST00000111265 3751 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Ttll5-205ENSMUST00000110224 4647 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Vstm2a-201ENSMUST00000109645 3264 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 CN725425-201ENSMUST00000109284 1929 ntAPPRIS ALT2 TSL 5 BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Gm44975-201ENSMUST00000207435 1390 ntBASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Gm43636-201ENSMUST00000201501 2235 ntBASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Lnx1-203ENSMUST00000113531 3098 ntTSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Ppfibp1-202ENSMUST00000111623 4782 ntAPPRIS ALT2 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Pcdh20-202ENSMUST00000192557 3362 ntAPPRIS P1 TSL 1 (best) BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Urb1-203ENSMUST00000140920 7344 ntAPPRIS P1 TSL 5 BASIC10.25□□□□□ -0.77
Pcdh19Q80TF3 Dcst2-201ENSMUST00000208216 2285 ntAPPRIS P1 TSL 5 BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Dbh-201ENSMUST00000000910 2552 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Gm4846-201ENSMUST00000143922 1744 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Ubxn6-201ENSMUST00000019722 2949 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 D2hgdh-201ENSMUST00000097633 3232 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Lrrk1-201ENSMUST00000015277 7465 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Tstd2-201ENSMUST00000107770 2700 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Tnpo3-201ENSMUST00000012679 4251 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Ppat-202ENSMUST00000140076 3981 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Il1r1-201ENSMUST00000027241 5819 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Lsamp-206ENSMUST00000187695 3411 ntTSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Kyat1-201ENSMUST00000044038 1876 ntAPPRIS P1 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Tmem131l-203ENSMUST00000192095 4774 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Ncoa1-209ENSMUST00000220434 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.24□□□□□ -0.77
Pcdh19Q80TF3 Gm22751-201ENSMUST00000102077 109 ntBASIC10.24□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 84 ms