Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Plch1-201ENSMUST00000048134 6259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.42□□□□□ -1.06
Trim63Q38HM4 Shprh-203ENSMUST00000159541 6679 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Nrxn3-201ENSMUST00000057634 4634 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Glod4-206ENSMUST00000169701 4203 ntTSL 2 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Ano7-202ENSMUST00000186641 3984 ntAPPRIS P3 TSL 5 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Mc1r-201ENSMUST00000098324 3638 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Slc25a30-201ENSMUST00000022580 3588 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Slc30a2-204ENSMUST00000105874 3153 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Ddr2-202ENSMUST00000170800 8289 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 AC102847.1-201ENSMUST00000228390 2498 ntBASIC8.41□□□□□ -1.06
Trim63Q38HM4 Alox15-201ENSMUST00000019068 2409 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Gm15774-201ENSMUST00000141810 2176 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Gm10538-201ENSMUST00000189499 1877 ntTSL 2 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Gm43211-201ENSMUST00000196901 1899 ntBASIC8.41□□□□□ -1.06
Trim63Q38HM4 Ptgs2os2-201ENSMUST00000181308 1745 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Poteg-201ENSMUST00000081321 1706 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 3000002C10Rik-201ENSMUST00000125451 1614 ntTSL 2 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Prdx3-201ENSMUST00000025961 1478 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Gm12097-201ENSMUST00000121523 1414 ntBASIC8.41□□□□□ -1.06
Trim63Q38HM4 AC133207.1-201ENSMUST00000218960 1431 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Cldn9-201ENSMUST00000085989 1435 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Epg5-201ENSMUST00000044622 9672 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Gm42995-201ENSMUST00000197047 1330 ntBASIC8.41□□□□□ -1.06
Trim63Q38HM4 Sec31b-201ENSMUST00000063632 3939 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Uox-202ENSMUST00000121133 768 ntTSL 5 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Gm14832-201ENSMUST00000121289 322 ntBASIC8.41□□□□□ -1.06
Trim63Q38HM4 2010320O07Rik-201ENSMUST00000160935 525 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Gm4271-201ENSMUST00000174444 973 ntBASIC8.41□□□□□ -1.06
Trim63Q38HM4 Mrip-ps-201ENSMUST00000184613 940 ntBASIC8.41□□□□□ -1.06
Trim63Q38HM4 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Gm28911-201ENSMUST00000188837 117 ntBASIC8.41□□□□□ -1.06
Trim63Q38HM4 Gm37259-201ENSMUST00000193903 849 ntBASIC8.41□□□□□ -1.06
Trim63Q38HM4 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Gm8234-201ENSMUST00000198523 1107 ntBASIC8.41□□□□□ -1.06
Trim63Q38HM4 Gm5865-201ENSMUST00000198713 637 ntBASIC8.41□□□□□ -1.06
Trim63Q38HM4 Sox2ot-217ENSMUST00000200414 710 ntTSL 3 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Gm43854-201ENSMUST00000200418 394 ntBASIC8.41□□□□□ -1.06
Trim63Q38HM4 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Gm3912-202ENSMUST00000210164 643 ntTSL 3 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Tpd52l1-203ENSMUST00000213639 827 ntAPPRIS ALT2 TSL 2 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 AC153954.1-201ENSMUST00000216959 255 ntBASIC8.41□□□□□ -1.06
Trim63Q38HM4 AC132260.2-201ENSMUST00000224482 344 ntBASIC8.41□□□□□ -1.06
Trim63Q38HM4 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Olfr323-201ENSMUST00000070804 972 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Gm4978-201ENSMUST00000071565 801 ntBASIC8.41□□□□□ -1.06
Trim63Q38HM4 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC8.41□□□□□ -1.06
Trim63Q38HM4 Vps11-201ENSMUST00000034644 3536 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Uspl1-202ENSMUST00000100410 3148 ntTSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Npy1r-201ENSMUST00000039303 3001 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Naip2-202ENSMUST00000117913 4823 ntAPPRIS P2 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Fam212b-201ENSMUST00000066610 4701 ntAPPRIS P3 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Vmn1r51-204ENSMUST00000226977 4357 ntAPPRIS P1 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Wdr25-201ENSMUST00000047115 4356 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Klf17-201ENSMUST00000062747 2400 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Gm31024-201ENSMUST00000207600 2353 ntBASIC8.41□□□□□ -1.06
Trim63Q38HM4 Olfr1232-203ENSMUST00000215679 2389 ntAPPRIS P1 TSL 5 BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Gm38348-201ENSMUST00000191718 2273 ntBASIC8.41□□□□□ -1.06
Trim63Q38HM4 AC160413.2-201ENSMUST00000217790 2280 ntBASIC8.41□□□□□ -1.06
Trim63Q38HM4 Pik3cg-202ENSMUST00000085469 4584 ntAPPRIS P1 TSL 1 (best) BASIC8.41□□□□□ -1.06
Trim63Q38HM4 Nup210l-201ENSMUST00000029548 5681 ntAPPRIS P2 TSL 5 BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Spata31d1b-201ENSMUST00000165133 4287 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Hs1bp3-201ENSMUST00000020927 2959 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Pnisr-203ENSMUST00000108229 2922 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Fmr1-206ENSMUST00000114657 4076 ntTSL 5 BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Bpifb2-201ENSMUST00000028983 1730 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Rad21-201ENSMUST00000022927 3956 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Gm45012-201ENSMUST00000208323 1666 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Btg1-201ENSMUST00000038377 5001 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Adra1a-205ENSMUST00000161339 2788 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Syt17-201ENSMUST00000081574 2764 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 AC124426.1-201ENSMUST00000220871 2707 ntTSL 2 BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Rc3h2-203ENSMUST00000112936 5828 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Slc25a35-201ENSMUST00000018884 3648 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Cobl-210ENSMUST00000174874 5451 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 2610028H24Rik-202ENSMUST00000105415 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Gm45757-201ENSMUST00000211835 1480 ntBASIC8.4□□□□□ -1.06
Trim63Q38HM4 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Vmn2r56-201ENSMUST00000163852 2340 ntAPPRIS P1 TSL 5 BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Gm11733-201ENSMUST00000092394 2311 ntAPPRIS P1 TSL 2 BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Sp1-204ENSMUST00000165924 4081 ntAPPRIS P2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Kctd19-201ENSMUST00000063071 3048 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Cdc25b-202ENSMUST00000079857 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Gm1821-201ENSMUST00000111388 685 ntBASIC8.4□□□□□ -1.06
Trim63Q38HM4 Gm13112-201ENSMUST00000138795 1258 ntTSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Gm7809-201ENSMUST00000153199 742 ntBASIC8.4□□□□□ -1.06
Trim63Q38HM4 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.06
Trim63Q38HM4 Ifrd1-204ENSMUST00000165027 1293 ntTSL 5 BASIC8.4□□□□□ -1.06
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms