Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 AC165092.1-201ENSMUST00000224018 486 ntBASIC12.01□□□□□ -0.49
Traf1P39428 AC149294.3-201ENSMUST00000226888 732 ntBASIC12.01□□□□□ -0.49
Traf1P39428 AC107711.4-201ENSMUST00000228948 440 ntBASIC12.01□□□□□ -0.49
Traf1P39428 Ptprg-201ENSMUST00000022264 9213 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Traf1P39428 Dync2li1-201ENSMUST00000025101 1324 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Traf1P39428 Prpf6-203ENSMUST00000136481 3048 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Traf1P39428 Gm45597-201ENSMUST00000211524 1994 ntBASIC12.01□□□□□ -0.49
Traf1P39428 Pak7-201ENSMUST00000035264 4848 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Traf1P39428 Eif2c5-201ENSMUST00000125609 1416 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Traf1P39428 Theg-201ENSMUST00000020566 1444 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Traf1P39428 Metap1-203ENSMUST00000197531 3708 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Traf1P39428 Lama4-201ENSMUST00000019992 6046 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Traf1P39428 Fgl2-201ENSMUST00000035799 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Traf1P39428 Nxpe1-ps-201ENSMUST00000209981 1454 ntBASIC12.01□□□□□ -0.49
Traf1P39428 Sap18-204ENSMUST00000128764 5125 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Traf1P39428 Fam71e2-202ENSMUST00000174409 2716 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Traf1P39428 Gm6727-201ENSMUST00000204102 1518 ntBASIC12.01□□□□□ -0.49
Traf1P39428 Fbxo43-201ENSMUST00000058643 4035 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Traf1P39428 Arhgap4-202ENSMUST00000114404 2895 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Traf1P39428 Palld-201ENSMUST00000034057 3566 ntAPPRIS P3 TSL 5 BASIC12□□□□□ -0.49
Traf1P39428 Tmprss11c-201ENSMUST00000059424 1615 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Traf1P39428 AC160340.2-201ENSMUST00000220812 3675 ntBASIC12□□□□□ -0.49
Traf1P39428 Cap2-202ENSMUST00000119341 2454 ntTSL 1 (best) BASIC12□□□□□ -0.49
Traf1P39428 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Traf1P39428 Olfr707-204ENSMUST00000213251 1777 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Traf1P39428 Chml-204ENSMUST00000211207 1866 ntAPPRIS P1 BASIC12□□□□□ -0.49
Traf1P39428 Mak16-201ENSMUST00000033983 1902 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Traf1P39428 Fan1-201ENSMUST00000163289 3460 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Traf1P39428 Pabpc4-201ENSMUST00000078734 2700 ntTSL 1 (best) BASIC12□□□□□ -0.49
Traf1P39428 Gm42587-201ENSMUST00000198462 1981 ntBASIC12□□□□□ -0.49
Traf1P39428 Mut-201ENSMUST00000169611 3675 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Traf1P39428 Anks1b-218ENSMUST00000182595 3715 ntTSL 5 BASIC12□□□□□ -0.49
Traf1P39428 Rab2b-201ENSMUST00000022765 2906 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Traf1P39428 Mkrn2os-202ENSMUST00000112957 964 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Traf1P39428 Gm15602-201ENSMUST00000116162 465 ntBASIC12□□□□□ -0.49
Traf1P39428 Gm12326-201ENSMUST00000132986 618 ntTSL 5 BASIC12□□□□□ -0.49
Traf1P39428 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC12□□□□□ -0.49
Traf1P39428 Gm8707-201ENSMUST00000183325 980 ntBASIC12□□□□□ -0.49
Traf1P39428 Gm6358-202ENSMUST00000187643 489 ntAPPRIS P5 BASIC12□□□□□ -0.49
Traf1P39428 Gm31678-201ENSMUST00000198262 454 ntTSL 3 BASIC12□□□□□ -0.49
Traf1P39428 Clec2h-202ENSMUST00000204416 386 ntTSL 3 BASIC12□□□□□ -0.49
Traf1P39428 Isca2-206ENSMUST00000222449 374 ntTSL 2 BASIC12□□□□□ -0.49
Traf1P39428 Gm8730-201ENSMUST00000076373 954 ntBASIC12□□□□□ -0.49
Traf1P39428 Ccdc30-203ENSMUST00000084307 989 ntTSL 1 (best) BASIC12□□□□□ -0.49
Traf1P39428 Ank1-204ENSMUST00000117270 5652 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Traf1P39428 Srpx2-201ENSMUST00000033606 2290 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Traf1P39428 AC154197.1-201ENSMUST00000225136 1382 ntBASIC12□□□□□ -0.49
Traf1P39428 Acsm5-205ENSMUST00000207440 2494 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Traf1P39428 Picalm-201ENSMUST00000049537 3528 ntTSL 1 (best) BASIC12□□□□□ -0.49
Traf1P39428 Gm42849-201ENSMUST00000202834 1584 ntTSL 5 BASIC12□□□□□ -0.49
Traf1P39428 Dock6-207ENSMUST00000217336 6880 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Traf1P39428 Atp13a4-201ENSMUST00000039090 2878 ntTSL 1 (best) BASIC12□□□□□ -0.49
Traf1P39428 Caprin1-202ENSMUST00000111147 4069 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Traf1P39428 Svil-211ENSMUST00000143254 6594 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Traf1P39428 Tfap2b-204ENSMUST00000187754 3023 ntTSL 1 (best) BASIC12□□□□□ -0.49
Traf1P39428 Myc-206ENSMUST00000167731 1821 ntTSL 1 (best) BASIC12□□□□□ -0.49
Traf1P39428 Serpina3g-201ENSMUST00000043315 1803 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Traf1P39428 Ndufb2-205ENSMUST00000135671 4371 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Traf1P39428 Plrg1-204ENSMUST00000150268 1851 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Traf1P39428 Gm12296-201ENSMUST00000144922 3220 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Traf1P39428 Spice1-201ENSMUST00000050897 4627 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Traf1P39428 Gm37242-201ENSMUST00000191873 2085 ntBASIC11.99□□□□□ -0.49
Traf1P39428 C330027C09Rik-201ENSMUST00000048374 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Traf1P39428 Thbs2-201ENSMUST00000170872 5922 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Traf1P39428 Gm44271-201ENSMUST00000204525 2600 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Traf1P39428 Gm13126-201ENSMUST00000117079 3063 ntBASIC11.99□□□□□ -0.49
Traf1P39428 Ciita-201ENSMUST00000023147 5254 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Traf1P39428 Sez6l-202ENSMUST00000079491 5857 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Traf1P39428 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Traf1P39428 Gm25561-201ENSMUST00000104607 125 ntBASIC11.99□□□□□ -0.49
Traf1P39428 Use1-203ENSMUST00000110054 973 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Traf1P39428 Gm6517-201ENSMUST00000121056 511 ntBASIC11.99□□□□□ -0.49
Traf1P39428 4930589P08Rik-201ENSMUST00000129097 1084 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Traf1P39428 Gm24943-201ENSMUST00000158329 433 ntBASIC11.99□□□□□ -0.49
Traf1P39428 Tnnt1-206ENSMUST00000163710 885 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Traf1P39428 Gm17733-201ENSMUST00000181883 1048 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Traf1P39428 Gm28356-201ENSMUST00000186941 927 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Traf1P39428 Gm37872-201ENSMUST00000192362 886 ntTSL 5 BASIC11.99□□□□□ -0.49
Traf1P39428 5033404E19Rik-202ENSMUST00000194748 1065 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Traf1P39428 Ndufa4-205ENSMUST00000204978 610 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Traf1P39428 3930402G23Rik-202ENSMUST00000208615 581 ntTSL 3 BASIC11.99□□□□□ -0.49
Traf1P39428 Tdpoz4-201ENSMUST00000075953 1113 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Traf1P39428 Cd300c2-201ENSMUST00000092464 1187 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Traf1P39428 Defa3-201ENSMUST00000098893 410 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Traf1P39428 Gm44975-201ENSMUST00000207435 1390 ntBASIC11.99□□□□□ -0.49
Traf1P39428 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Traf1P39428 Gm8050-201ENSMUST00000171987 1595 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Traf1P39428 AC122367.1-201ENSMUST00000221978 1709 ntBASIC11.99□□□□□ -0.49
Traf1P39428 Cct3-201ENSMUST00000001452 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Traf1P39428 Bpifb9b-201ENSMUST00000088921 2067 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Traf1P39428 AC122382.1-201ENSMUST00000225869 2371 ntBASIC11.99□□□□□ -0.49
Traf1P39428 Tnxb-201ENSMUST00000087399 12209 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Traf1P39428 Gm4454-201ENSMUST00000190585 2578 ntBASIC11.99□□□□□ -0.49
Traf1P39428 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Traf1P39428 Gosr2-201ENSMUST00000021329 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Traf1P39428 Osbpl7-206ENSMUST00000168565 3535 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Traf1P39428 A130010J15Rik-205ENSMUST00000178744 3782 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Traf1P39428 Oplah-201ENSMUST00000023222 3970 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Traf1P39428 Uaca-202ENSMUST00000214354 4417 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Traf1P39428 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 55.5 ms