Protein–RNA interactions for Protein: O54890

Itgb3, Integrin beta-3, mousemouse

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Itgb3O54890 Gtf2ird1-204ENSMUST00000100652 3693 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Itgb3O54890 Ddx21-201ENSMUST00000045866 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Itgb3O54890 Wdr95-207ENSMUST00000202902 2574 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Itgb3O54890 Pcdhb20-201ENSMUST00000052179 3559 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Itgb3O54890 Pold1-201ENSMUST00000049343 3454 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Itgb3O54890 Calhm2-201ENSMUST00000035822 2458 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Itgb3O54890 Pnpla6-212ENSMUST00000208002 4444 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Itgb3O54890 D030055H07Rik-202ENSMUST00000150953 4325 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Itgb3O54890 Creb3l4-202ENSMUST00000107369 1404 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Itgb3O54890 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Itgb3O54890 Ank3-242ENSMUST00000183261 4999 ntTSL 5 BASIC10.95□□□□□ -0.66
Itgb3O54890 Tmod2-202ENSMUST00000098552 9871 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Itgb3O54890 Gm15707-201ENSMUST00000118804 996 ntBASIC10.95□□□□□ -0.66
Itgb3O54890 Gm15793-201ENSMUST00000121857 495 ntBASIC10.95□□□□□ -0.66
Itgb3O54890 Igkv4-54-201ENSMUST00000177697 288 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Itgb3O54890 Gm27241-201ENSMUST00000183517 622 ntTSL 3 BASIC10.95□□□□□ -0.66
Itgb3O54890 Gm37257-201ENSMUST00000194871 717 ntTSL 5 BASIC10.95□□□□□ -0.66
Itgb3O54890 Gm5905-201ENSMUST00000211731 580 ntBASIC10.95□□□□□ -0.66
Itgb3O54890 AC140314.1-201ENSMUST00000219549 554 ntBASIC10.95□□□□□ -0.66
Itgb3O54890 AC242269.1-201ENSMUST00000227020 741 ntBASIC10.95□□□□□ -0.66
Itgb3O54890 Rasl11a-201ENSMUST00000031646 1126 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Itgb3O54890 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC10.95□□□□□ -0.66
Itgb3O54890 Rpap2-204ENSMUST00000112654 2914 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Itgb3O54890 Hmgcr-201ENSMUST00000022176 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Itgb3O54890 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Itgb3O54890 Gm20953-201ENSMUST00000216399 2614 ntBASIC10.95□□□□□ -0.66
Itgb3O54890 Shoc2-201ENSMUST00000025932 4106 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Itgb3O54890 Madd-206ENSMUST00000099725 5905 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Itgb3O54890 Spag6l-201ENSMUST00000023468 2416 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Itgb3O54890 Zfp354a-201ENSMUST00000020628 1719 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Itgb3O54890 Cfap43-202ENSMUST00000095998 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Itgb3O54890 4933408B17Rik-201ENSMUST00000056932 2362 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Itgb3O54890 AC153506.1-201ENSMUST00000218768 2915 ntBASIC10.95□□□□□ -0.66
Itgb3O54890 Gm2721-201ENSMUST00000222380 1571 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Ap1b1-201ENSMUST00000009234 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Gm38048-201ENSMUST00000193778 2174 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Nemp2-201ENSMUST00000165859 3396 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Itgb3O54890 Amd-ps3-201ENSMUST00000072796 1496 ntBASIC10.94□□□□□ -0.66
Itgb3O54890 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC10.94□□□□□ -0.66
Itgb3O54890 Fkbp6-201ENSMUST00000044972 1447 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Itgb3O54890 Prrg3-201ENSMUST00000048790 5931 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 App-206ENSMUST00000227723 8167 ntAPPRIS ALT2 BASIC10.94□□□□□ -0.66
Itgb3O54890 Gpr149-201ENSMUST00000058535 4222 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 N4bp2-201ENSMUST00000087264 5308 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Itgb3O54890 Themis2-201ENSMUST00000045154 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Zdhhc9-201ENSMUST00000037960 2982 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Dysf-202ENSMUST00000089595 6613 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Itgb3O54890 Aldh1a3-201ENSMUST00000015278 3443 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Zc3hav1-201ENSMUST00000031850 3400 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Tmem67-202ENSMUST00000108293 3945 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Itgb3O54890 Pcdhb10-201ENSMUST00000051126 2851 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
Itgb3O54890 Col20a1-202ENSMUST00000149179 3867 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Itgb3O54890 Ccdc42-202ENSMUST00000102612 785 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Gm25561-201ENSMUST00000104607 125 ntBASIC10.94□□□□□ -0.66
Itgb3O54890 Surf6-202ENSMUST00000114043 894 ntTSL 5 BASIC10.94□□□□□ -0.66
Itgb3O54890 Gm14853-201ENSMUST00000116081 549 ntBASIC10.94□□□□□ -0.66
Itgb3O54890 Gm12035-201ENSMUST00000121890 623 ntBASIC10.94□□□□□ -0.66
Itgb3O54890 Gm16069-201ENSMUST00000131146 545 ntTSL 3 BASIC10.94□□□□□ -0.66
Itgb3O54890 Gm12000-201ENSMUST00000132007 629 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 1700057H21Rik-202ENSMUST00000154530 506 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Gm20091-201ENSMUST00000179683 189 ntBASIC10.94□□□□□ -0.66
Itgb3O54890 1700026J14Rik-201ENSMUST00000180937 794 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Gm6773-201ENSMUST00000182377 878 ntBASIC10.94□□□□□ -0.66
Itgb3O54890 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC10.94□□□□□ -0.66
Itgb3O54890 Gm6008-201ENSMUST00000206542 874 ntBASIC10.94□□□□□ -0.66
Itgb3O54890 Gm5130-201ENSMUST00000210233 959 ntBASIC10.94□□□□□ -0.66
Itgb3O54890 Hamp2-203ENSMUST00000217812 437 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 AC156016.4-201ENSMUST00000227470 647 ntBASIC10.94□□□□□ -0.66
Itgb3O54890 4930546C10Rik-201ENSMUST00000025428 363 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Itgb3O54890 Il7-204ENSMUST00000194184 1785 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Ttll7-203ENSMUST00000106134 2664 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Itgb3O54890 Gm4880-201ENSMUST00000207645 1696 ntBASIC10.94□□□□□ -0.66
Itgb3O54890 Supt20-201ENSMUST00000029315 2112 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Sfi1-202ENSMUST00000081318 3969 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Ttll2-201ENSMUST00000115747 1623 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Ucp1-201ENSMUST00000034146 1636 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Scmh1-202ENSMUST00000064991 2548 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Itgb3O54890 Serpina1e-202ENSMUST00000122229 1575 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Notch2-201ENSMUST00000079812 10500 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Mrgpre-201ENSMUST00000054048 3761 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Rere-202ENSMUST00000105682 7728 ntAPPRIS P2 TSL 5 BASIC10.94□□□□□ -0.66
Itgb3O54890 Wdr13-201ENSMUST00000033506 4183 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 BC004004-201ENSMUST00000064709 2803 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Pex13-201ENSMUST00000020523 4146 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Exoc7-202ENSMUST00000106411 3205 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Arhgap24-204ENSMUST00000112852 2783 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Lactb2-201ENSMUST00000027071 4494 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Itgb3O54890 Gtf2i-223ENSMUST00000174513 4021 ntAPPRIS ALT2 TSL 2 BASIC10.93□□□□□ -0.66
Itgb3O54890 AC154575.1-201ENSMUST00000227166 1474 ntBASIC10.93□□□□□ -0.66
Itgb3O54890 Grik1-201ENSMUST00000023652 3554 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Itgb3O54890 Cfb-207ENSMUST00000176203 2733 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Itgb3O54890 Cfb-201ENSMUST00000025229 2737 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
Itgb3O54890 Per1-202ENSMUST00000101004 3507 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Itgb3O54890 Mecomos-201ENSMUST00000125611 5510 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
Itgb3O54890 Ppp1r26-205ENSMUST00000189694 5463 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Itgb3O54890 Ppp1r26-201ENSMUST00000040324 5466 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Itgb3O54890 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
Itgb3O54890 Gramd1b-212ENSMUST00000165104 3824 ntAPPRIS P2 TSL 5 BASIC10.93□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms