Protein–RNA interactions for Protein: Q80TF3

Pcdh19, Protocadherin-19, mousemouse

Predictions only

Length 1,145 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh19Q80TF3 Zfp92-201ENSMUST00000033740 5767 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Limk2-201ENSMUST00000101638 3514 ntAPPRIS P4 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Trbv31-201ENSMUST00000103300 334 ntAPPRIS ALT2 BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Gm3476-201ENSMUST00000112742 853 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Bex3-203ENSMUST00000113113 766 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Gm12489-201ENSMUST00000119364 148 ntBASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Gm14231-201ENSMUST00000120090 592 ntBASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Gm15554-201ENSMUST00000120406 913 ntBASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Gm24140-201ENSMUST00000122773 326 ntBASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Gm16263-201ENSMUST00000144680 502 ntTSL 3 BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Tmem229b-ps-201ENSMUST00000168554 506 ntBASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 7420461P10Rik-201ENSMUST00000169439 781 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 4931440J10Rik-201ENSMUST00000181344 891 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Map1lc3b-205ENSMUST00000181948 766 ntTSL 2 BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Gm7627-201ENSMUST00000183205 999 ntBASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Gm29669-201ENSMUST00000188605 881 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 1700048F04Rik-201ENSMUST00000199057 1064 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Gm43811-201ENSMUST00000202862 695 ntBASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 AC138290.1-201ENSMUST00000219242 820 ntTSL 5 BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Gm32296-201ENSMUST00000220590 1057 ntTSL 3 BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 CAAA01139602.1-201ENSMUST00000222545 283 ntBASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Gm40910-202ENSMUST00000223077 569 ntTSL 5 BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Gm26861-207ENSMUST00000223253 1095 ntTSL 5 BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 AC133496.1-201ENSMUST00000223891 743 ntBASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Krtap2-4-201ENSMUST00000074926 828 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Olfr1219-201ENSMUST00000099797 936 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Tsc22d4-202ENSMUST00000100539 3983 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Mapkap1-209ENSMUST00000147337 3111 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Chp1-202ENSMUST00000119172 3027 ntTSL 2 BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Mpl-202ENSMUST00000102671 2934 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Trpm1-201ENSMUST00000085222 5711 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Aspm-201ENSMUST00000053364 9867 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Ccl22-201ENSMUST00000034231 2216 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Mbd1-202ENSMUST00000224047 2838 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 Slc13a5-205ENSMUST00000208056 3111 ntTSL 5 BASIC10.29□□□□□ -0.76
Pcdh19Q80TF3 D630003M21Rik-201ENSMUST00000046944 3910 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Arhgap11a-202ENSMUST00000110947 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Tctn3-201ENSMUST00000025981 2743 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Pcdha4-201ENSMUST00000192295 4129 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Epn2-203ENSMUST00000108712 4458 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Gm43375-201ENSMUST00000196705 2480 ntBASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Bcl11a-203ENSMUST00000109516 2329 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Gm44913-201ENSMUST00000208060 2990 ntBASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Gpatch2-204ENSMUST00000110943 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Cacna1e-207ENSMUST00000211821 6765 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Lrrc23-202ENSMUST00000112475 1444 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Gm8094-201ENSMUST00000165136 1408 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Mir671-201ENSMUST00000102432 98 ntBASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Nifk-202ENSMUST00000112688 849 ntTSL 5 BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Olfr1372-ps1-201ENSMUST00000121007 934 ntBASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Mir1896-201ENSMUST00000122641 81 ntBASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Gm45591-201ENSMUST00000129058 843 ntTSL 3 BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Tnni1-204ENSMUST00000139986 651 ntTSL 5 BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 St8sia3os-204ENSMUST00000140903 383 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Tex33-202ENSMUST00000165170 1072 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Gm4705-201ENSMUST00000177415 354 ntBASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 1700088E04Rik-207ENSMUST00000188562 631 ntTSL 3 BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Gm37944-201ENSMUST00000194233 414 ntBASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Gm42493-201ENSMUST00000197559 1121 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Gm43124-201ENSMUST00000201878 278 ntBASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Gm44548-201ENSMUST00000208929 192 ntBASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 4930555F03Rik-201ENSMUST00000033963 717 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Gm5278-201ENSMUST00000055957 552 ntBASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Defb29-201ENSMUST00000060598 462 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Olfr311-201ENSMUST00000071625 927 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Tex33-201ENSMUST00000074380 1147 ntAPPRIS P4 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Olfr1106-201ENSMUST00000099867 939 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Pde6c-202ENSMUST00000112329 2895 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Tcp11l2-201ENSMUST00000020223 2725 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Gm40557-201ENSMUST00000220782 2736 ntTSL 5 BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Lztr1-202ENSMUST00000115681 3394 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Man2c1-201ENSMUST00000034836 3215 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Brat1-203ENSMUST00000110806 3854 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Dnajb12-204ENSMUST00000146590 3070 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Stx8-201ENSMUST00000021285 4394 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Gm45397-201ENSMUST00000209816 1600 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Matn2-205ENSMUST00000227759 3569 ntAPPRIS ALT2 BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 AC154640.1-203ENSMUST00000228316 1618 ntBASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Gm44415-201ENSMUST00000204151 2112 ntBASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Celf1-205ENSMUST00000111449 4441 ntAPPRIS ALT1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Mcemp1-201ENSMUST00000014118 1494 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Hmg20a-206ENSMUST00000217518 2468 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Ldb3-202ENSMUST00000022328 2468 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Plcd4-205ENSMUST00000113749 4648 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Micalcl-203ENSMUST00000106645 2309 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Plpp3-201ENSMUST00000064139 3159 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Plcd4-206ENSMUST00000113750 2692 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Gm20425-201ENSMUST00000166836 3028 ntAPPRIS P1 TSL 5 BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Gm43625-201ENSMUST00000199177 1539 ntBASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.28□□□□□ -0.76
Pcdh19Q80TF3 Imp4-201ENSMUST00000027303 5836 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms