Protein–RNA interactions for Protein: P53564

Cux1, Homeobox protein cut-like 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cux1P53564 AC068459.1-201ENSMUST00000222492 905 ntTSL 3 BASIC15.71■□□□□ 0.11
Cux1P53564 Gm16702-201ENSMUST00000181180 2384 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cux1P53564 Nox1-204ENSMUST00000159259 1581 ntTSL 5 BASIC15.71■□□□□ 0.11
Cux1P53564 Skap2-201ENSMUST00000078214 1583 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cux1P53564 Plod3-201ENSMUST00000004968 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Cux1P53564 Fam234b-202ENSMUST00000111916 2927 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Cux1P53564 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Cux1P53564 Gm26778-201ENSMUST00000181443 3805 ntTSL 5 BASIC15.71■□□□□ 0.1
Cux1P53564 AC160138.2-201ENSMUST00000220255 1531 ntBASIC15.71■□□□□ 0.1
Cux1P53564 AC187103.1-202ENSMUST00000223904 1536 ntBASIC15.71■□□□□ 0.1
Cux1P53564 Cand1-201ENSMUST00000020315 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cux1P53564 Cdk5rap1-201ENSMUST00000028990 1970 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cux1P53564 Entpd5-206ENSMUST00000122194 2145 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cux1P53564 Gm43499-201ENSMUST00000202091 2107 ntBASIC15.71■□□□□ 0.1
Cux1P53564 Pik3cb-201ENSMUST00000035037 6478 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Cux1P53564 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC15.7■□□□□ 0.1
Cux1P53564 Gm38357-201ENSMUST00000195382 2464 ntBASIC15.7■□□□□ 0.1
Cux1P53564 9530056K15Rik-201ENSMUST00000061947 2315 ntBASIC15.7■□□□□ 0.1
Cux1P53564 Astn1-209ENSMUST00000194369 3344 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cux1P53564 Slc37a2-201ENSMUST00000115068 5943 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cux1P53564 Samsn1-201ENSMUST00000114239 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cux1P53564 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cux1P53564 Slc39a9-208ENSMUST00000219706 5427 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cux1P53564 Acsl6-203ENSMUST00000072178 2432 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
Cux1P53564 Zfp131-203ENSMUST00000223722 3109 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Cux1P53564 Taz-213ENSMUST00000135504 747 ntTSL 5 BASIC15.7■□□□□ 0.1
Cux1P53564 Gm15699-201ENSMUST00000159213 280 ntTSL 5 BASIC15.7■□□□□ 0.1
Cux1P53564 Gm9825-201ENSMUST00000178598 843 ntBASIC15.7■□□□□ 0.1
Cux1P53564 2900076A07Rik-201ENSMUST00000180385 914 ntTSL 3 BASIC15.7■□□□□ 0.1
Cux1P53564 Gm26930-201ENSMUST00000194874 1244 ntBASIC15.7■□□□□ 0.1
Cux1P53564 Gm6073-201ENSMUST00000198253 466 ntBASIC15.7■□□□□ 0.1
Cux1P53564 Gm42871-201ENSMUST00000199333 315 ntTSL 5 BASIC15.7■□□□□ 0.1
Cux1P53564 4933439N14Rik-201ENSMUST00000211062 1087 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cux1P53564 Gm29961-202ENSMUST00000215431 637 ntTSL 5 BASIC15.7■□□□□ 0.1
Cux1P53564 Gm40578-202ENSMUST00000221429 920 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cux1P53564 1700029F12Rik-201ENSMUST00000091377 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cux1P53564 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC15.7■□□□□ 0.1
Cux1P53564 Rpusd4-201ENSMUST00000034543 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cux1P53564 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cux1P53564 Gm10912-201ENSMUST00000104891 1661 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
Cux1P53564 Pfkm-201ENSMUST00000051226 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cux1P53564 4930570G19Rik-201ENSMUST00000139363 3112 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cux1P53564 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cux1P53564 Gm20696-201ENSMUST00000155466 3560 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Cux1P53564 Etfbkmt-204ENSMUST00000111551 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cux1P53564 Etfbkmt-201ENSMUST00000047531 1562 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cux1P53564 Atp5g1-201ENSMUST00000090541 4715 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Cux1P53564 Mical1-202ENSMUST00000099934 3292 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Cux1P53564 Stx11-201ENSMUST00000042861 4173 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cux1P53564 5730419F03Rik-201ENSMUST00000190504 2092 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cux1P53564 Xrcc2-201ENSMUST00000030773 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cux1P53564 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC15.69■□□□□ 0.1
Cux1P53564 Pcdhb20-201ENSMUST00000052179 3559 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Cux1P53564 Trex1-202ENSMUST00000112053 1054 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cux1P53564 Gm12700-201ENSMUST00000118145 457 ntBASIC15.69■□□□□ 0.1
Cux1P53564 Gm10045-201ENSMUST00000178657 483 ntBASIC15.69■□□□□ 0.1
Cux1P53564 Gm29388-201ENSMUST00000190718 284 ntTSL 3 BASIC15.69■□□□□ 0.1
Cux1P53564 Tmem147-207ENSMUST00000209065 727 ntTSL 2 BASIC15.69■□□□□ 0.1
Cux1P53564 Gm18873-201ENSMUST00000219517 1045 ntBASIC15.69■□□□□ 0.1
Cux1P53564 Gm18504-201ENSMUST00000220917 929 ntBASIC15.69■□□□□ 0.1
Cux1P53564 AC133598.3-207ENSMUST00000225918 704 ntBASIC15.69■□□□□ 0.1
Cux1P53564 Cacna2d3-208ENSMUST00000225985 918 ntBASIC15.69■□□□□ 0.1
Cux1P53564 Cd1d2-203ENSMUST00000194208 1527 ntAPPRIS P5 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cux1P53564 Rassf9-201ENSMUST00000055355 1526 ntTSL 5 BASIC15.69■□□□□ 0.1
Cux1P53564 Isx-201ENSMUST00000034034 1793 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cux1P53564 Pip5k1a-205ENSMUST00000107233 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cux1P53564 Nefm-202ENSMUST00000111089 3680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cux1P53564 Plcb2-206ENSMUST00000159756 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cux1P53564 Gm43827-201ENSMUST00000200623 1390 ntBASIC15.69■□□□□ 0.1
Cux1P53564 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Cux1P53564 Pcdhgb6-201ENSMUST00000003599 4684 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cux1P53564 Amn1-202ENSMUST00000111535 1457 ntAPPRIS P2 TSL 5 BASIC15.69■□□□□ 0.1
Cux1P53564 Lox-201ENSMUST00000025409 3604 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cux1P53564 Stat5a-202ENSMUST00000107356 3738 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cux1P53564 Stk4-201ENSMUST00000018353 5232 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Cux1P53564 Sfrp4-203ENSMUST00000222464 4049 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Cux1P53564 8430423G03Rik-201ENSMUST00000110507 639 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cux1P53564 Gm14856-201ENSMUST00000121548 613 ntBASIC15.68■□□□□ 0.1
Cux1P53564 Gm13855-201ENSMUST00000145644 744 ntTSL 2 BASIC15.68■□□□□ 0.1
Cux1P53564 Bud31-206ENSMUST00000162308 705 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cux1P53564 Scgb1b27-202ENSMUST00000173387 762 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Cux1P53564 Mrgpra3-201ENSMUST00000176369 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cux1P53564 Gm6317-201ENSMUST00000183159 1000 ntBASIC15.68■□□□□ 0.1
Cux1P53564 1700109K24Rik-202ENSMUST00000227532 1030 ntBASIC15.68■□□□□ 0.1
Cux1P53564 Ccr8-201ENSMUST00000048777 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cux1P53564 Olfr96-201ENSMUST00000078209 1051 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Cux1P53564 Capn3-206ENSMUST00000110721 2898 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cux1P53564 Ap1m2-201ENSMUST00000003397 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cux1P53564 Grpr-201ENSMUST00000033730 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cux1P53564 Thg1l-201ENSMUST00000011398 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cux1P53564 Ak4-202ENSMUST00000106945 4175 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cux1P53564 Prpf18-204ENSMUST00000152362 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cux1P53564 Hnrnph2-205ENSMUST00000113203 2315 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Cux1P53564 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cux1P53564 1810014B01Rik-202ENSMUST00000218095 1622 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Cux1P53564 Csnk1g1-214ENSMUST00000206594 2482 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Cux1P53564 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Cux1P53564 Rhox12-202ENSMUST00000115146 561 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Cux1P53564 Gm14174-201ENSMUST00000153158 161 ntTSL 5 BASIC15.68■□□□□ 0.1
Cux1P53564 Ube2i-214ENSMUST00000174216 1144 ntTSL 2 BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms