Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Gm5130-201ENSMUST00000210233 959 ntBASIC10.68□□□□□ -0.7
Atf6F6VAN0 AC163703.1-201ENSMUST00000214133 339 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.7
Atf6F6VAN0 Gm10752-201ENSMUST00000218348 729 ntBASIC10.68□□□□□ -0.7
Atf6F6VAN0 AC154572.1-201ENSMUST00000226098 1204 ntBASIC10.68□□□□□ -0.7
Atf6F6VAN0 AC154407.1-201ENSMUST00000226777 526 ntBASIC10.68□□□□□ -0.7
Atf6F6VAN0 Rpl24-201ENSMUST00000023269 677 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atf6F6VAN0 Gm9873-201ENSMUST00000063891 1097 ntBASIC10.68□□□□□ -0.7
Atf6F6VAN0 Specc1-208ENSMUST00000201624 2518 ntTSL 5 BASIC10.68□□□□□ -0.7
Atf6F6VAN0 Adgrl3-217ENSMUST00000121707 6690 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
Atf6F6VAN0 Gm43014-201ENSMUST00000198568 2443 ntBASIC10.68□□□□□ -0.7
Atf6F6VAN0 Lrsam1-202ENSMUST00000113200 4030 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
Atf6F6VAN0 4932442E05Rik-201ENSMUST00000191892 2717 ntBASIC10.68□□□□□ -0.7
Atf6F6VAN0 AC124561.1-202ENSMUST00000228652 1929 ntBASIC10.68□□□□□ -0.7
Atf6F6VAN0 Fam161a-201ENSMUST00000058269 1927 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atf6F6VAN0 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Atf6F6VAN0 Hsdl1-204ENSMUST00000212517 2215 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
Atf6F6VAN0 Polh-201ENSMUST00000024749 2569 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atf6F6VAN0 4931406C07Rik-201ENSMUST00000034414 2562 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atf6F6VAN0 Zfp617-201ENSMUST00000119003 2920 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atf6F6VAN0 Slfn3-201ENSMUST00000019130 1816 ntAPPRIS P2 TSL 1 (best) BASIC10.68□□□□□ -0.7
Atf6F6VAN0 Nfkbiz-204ENSMUST00000114458 3627 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Zcchc7-203ENSMUST00000107824 2503 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Rasgrp4-201ENSMUST00000032811 4621 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Rasgrp4-202ENSMUST00000094617 4617 ntTSL 5 BASIC10.67□□□□□ -0.7
Atf6F6VAN0 9630001P10Rik-201ENSMUST00000181083 2799 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Acp1-202ENSMUST00000074038 2754 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 AI606181-201ENSMUST00000099454 2796 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Gm3712-201ENSMUST00000118523 2071 ntBASIC10.67□□□□□ -0.7
Atf6F6VAN0 Gm44975-201ENSMUST00000207435 1390 ntBASIC10.67□□□□□ -0.7
Atf6F6VAN0 Cntrl-201ENSMUST00000028235 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Shroom2-202ENSMUST00000101141 7494 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Dnaja1-201ENSMUST00000030118 3376 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Kcnv1-201ENSMUST00000022967 4389 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Cox17-202ENSMUST00000120495 3690 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Exoc7-201ENSMUST00000021147 3337 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Gm45867-201ENSMUST00000208201 2317 ntBASIC10.67□□□□□ -0.7
Atf6F6VAN0 Tmem106a-201ENSMUST00000039581 2304 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 9430015G10Rik-202ENSMUST00000105576 1329 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Zfp386-201ENSMUST00000073551 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Gm10093-201ENSMUST00000079363 1977 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Rrm2b-201ENSMUST00000022901 4561 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Clip1-203ENSMUST00000111561 5883 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Klhl22-202ENSMUST00000120488 2596 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Mitf-201ENSMUST00000043628 1921 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Syngr4-202ENSMUST00000120299 722 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Cntrobos-201ENSMUST00000132834 383 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Gm15579-201ENSMUST00000141299 757 ntTSL 3 BASIC10.67□□□□□ -0.7
Atf6F6VAN0 1700123M08Rik-202ENSMUST00000146154 770 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Gm26812-202ENSMUST00000181776 599 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Tbc1d24-211ENSMUST00000201583 893 ntTSL 5 BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Fcer2a-205ENSMUST00000208145 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 AC161052.1-201ENSMUST00000222856 910 ntTSL 5 BASIC10.67□□□□□ -0.7
Atf6F6VAN0 AC164883.7-201ENSMUST00000228534 851 ntBASIC10.67□□□□□ -0.7
Atf6F6VAN0 Vps25-201ENSMUST00000007533 615 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Ralgps1-205ENSMUST00000131298 6035 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Ing3-202ENSMUST00000115389 2546 ntTSL 5 BASIC10.67□□□□□ -0.7
Atf6F6VAN0 CT868720.1-201ENSMUST00000223069 2544 ntBASIC10.67□□□□□ -0.7
Atf6F6VAN0 Pgf-201ENSMUST00000004913 1582 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Pgbd5-206ENSMUST00000172566 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Eng-205ENSMUST00000167841 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Cdh18-207ENSMUST00000226693 2165 ntBASIC10.67□□□□□ -0.7
Atf6F6VAN0 P4ha1-201ENSMUST00000009789 4043 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 BC035947-201ENSMUST00000170511 3063 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Atg2a-201ENSMUST00000045351 6371 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Son-204ENSMUST00000119368 7529 ntTSL 5 BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Xab2-201ENSMUST00000019614 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Urod-201ENSMUST00000030446 1489 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Ppp1r32-201ENSMUST00000038842 1458 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Atcay-201ENSMUST00000047408 3736 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Gm13120-201ENSMUST00000117343 1446 ntBASIC10.67□□□□□ -0.7
Atf6F6VAN0 Gm26637-201ENSMUST00000180880 2289 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Atf6F6VAN0 Sorcs1-208ENSMUST00000211687 7080 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atf6F6VAN0 Riok3-201ENSMUST00000025270 3661 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atf6F6VAN0 5730596B20Rik-201ENSMUST00000070587 3354 ntAPPRIS P1 BASIC10.66□□□□□ -0.7
Atf6F6VAN0 Oma1-201ENSMUST00000035780 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atf6F6VAN0 Olfr71-203ENSMUST00000217544 2707 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
Atf6F6VAN0 4930432K21Rik-201ENSMUST00000093375 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atf6F6VAN0 Mrps23-201ENSMUST00000024486 1332 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atf6F6VAN0 Fgf14-201ENSMUST00000026631 3180 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atf6F6VAN0 Ezr-201ENSMUST00000064234 3164 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atf6F6VAN0 Pck2-201ENSMUST00000048781 3400 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Atf6F6VAN0 Cpvl-201ENSMUST00000166545 1597 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atf6F6VAN0 Pif1-201ENSMUST00000047099 3685 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atf6F6VAN0 Abcc3-201ENSMUST00000021231 4999 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atf6F6VAN0 Ptk2b-202ENSMUST00000089250 3903 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Atf6F6VAN0 4833418N02Rik-201ENSMUST00000137539 1820 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Atf6F6VAN0 Suclg2-204ENSMUST00000204224 3367 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atf6F6VAN0 Blnk-201ENSMUST00000054769 2097 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atf6F6VAN0 Tardbp-206ENSMUST00000105702 6425 ntTSL 5 BASIC10.66□□□□□ -0.7
Atf6F6VAN0 Papss1-206ENSMUST00000200527 2811 ntTSL 5 BASIC10.66□□□□□ -0.7
Atf6F6VAN0 Mir291b-201ENSMUST00000104838 79 ntBASIC10.66□□□□□ -0.7
Atf6F6VAN0 Vbp1-202ENSMUST00000114070 632 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Atf6F6VAN0 Gm22709-201ENSMUST00000116893 111 ntBASIC10.66□□□□□ -0.7
Atf6F6VAN0 Ifitm7-201ENSMUST00000117803 853 ntAPPRIS P5 TSL 1 (best) BASIC10.66□□□□□ -0.7
Atf6F6VAN0 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC10.66□□□□□ -0.7
Atf6F6VAN0 Gm16322-202ENSMUST00000141275 700 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Atf6F6VAN0 Gas5-224ENSMUST00000162558 502 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
Atf6F6VAN0 Gm22923-201ENSMUST00000174952 110 ntBASIC10.66□□□□□ -0.7
Atf6F6VAN0 Mir8111-201ENSMUST00000184463 137 ntBASIC10.66□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms