Protein–RNA interactions for Protein: B2RUQ2

Usf3, Gene model 608, (NCBI), mousemouse

Predictions only

Length 2,221 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usf3B2RUQ2 Gm12829-201ENSMUST00000146346 2434 ntTSL 1 (best) BASIC8.7□□□□□ -1.02
Usf3B2RUQ2 Ackr2-202ENSMUST00000214340 3015 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Phc1-211ENSMUST00000161054 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Sall4-203ENSMUST00000103074 3741 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Megf11-201ENSMUST00000068967 6680 ntTSL 2 BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Csde1-207ENSMUST00000197827 2671 ntAPPRIS P3 TSL 5 BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Adam6a-201ENSMUST00000053086 2558 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Cdh23-202ENSMUST00000105461 11096 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Tjp1-201ENSMUST00000032729 6102 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 4930578C19Rik-201ENSMUST00000044188 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Gm37160-201ENSMUST00000193081 1689 ntBASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Thoc6-202ENSMUST00000095579 1450 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Fam229b-208ENSMUST00000139743 679 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 1700017J07Rik-201ENSMUST00000140241 473 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 4930471C04Rik-201ENSMUST00000166038 865 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Mir6387-201ENSMUST00000184042 108 ntBASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Mir7088-201ENSMUST00000184227 86 ntBASIC8.69□□□□□ -1.02
Usf3B2RUQ2 1500015A07Rik-202ENSMUST00000184530 423 ntTSL 3 BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 6720482G16Rik-201ENSMUST00000199552 1192 ntBASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Fgfbp1-203ENSMUST00000199894 1228 ntAPPRIS P1 TSL 3 BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 AC107752.1-201ENSMUST00000219362 469 ntBASIC8.69□□□□□ -1.02
Usf3B2RUQ2 AC134793.1-202ENSMUST00000227444 803 ntBASIC8.69□□□□□ -1.02
Usf3B2RUQ2 AC102523.1-201ENSMUST00000228706 1144 ntBASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Rps14-201ENSMUST00000025511 683 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Cypt12-201ENSMUST00000029080 550 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Haao-201ENSMUST00000000687 1222 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Arid2-201ENSMUST00000096250 8507 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Adamtsl4-201ENSMUST00000015994 3856 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Slc22a14-204ENSMUST00000170400 2110 ntAPPRIS P1 TSL 5 BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Hmbox1-201ENSMUST00000022544 3396 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Gm44913-201ENSMUST00000208060 2990 ntBASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Ubap2l-215ENSMUST00000198322 3385 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Vwf-203ENSMUST00000112254 8834 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Atg4b-201ENSMUST00000027502 4173 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Etv1-204ENSMUST00000160701 1578 ntTSL 5 BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Ints3-201ENSMUST00000029542 4337 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Ccdc33-204ENSMUST00000119665 2552 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Gm26797-202ENSMUST00000213132 2562 ntTSL 5 BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Bbs7-201ENSMUST00000040148 2599 ntAPPRIS ALT1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Dcun1d4-201ENSMUST00000063882 4116 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Gm38192-201ENSMUST00000194364 1847 ntBASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Gm13426-201ENSMUST00000117887 795 ntBASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Tmem204-202ENSMUST00000153745 902 ntTSL 2 BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Gm22763-201ENSMUST00000158374 107 ntBASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Dnajc4-202ENSMUST00000179118 840 ntAPPRIS P2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Gm29346-201ENSMUST00000188147 255 ntTSL 3 BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Tcstv1-202ENSMUST00000190512 875 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Gm38233-201ENSMUST00000194259 807 ntBASIC8.69□□□□□ -1.02
Usf3B2RUQ2 9530062K07Rik-201ENSMUST00000203332 787 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Gm45680-201ENSMUST00000211135 214 ntTSL 3 BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Gm46328-201ENSMUST00000217924 976 ntTSL 5 BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Olfr963-201ENSMUST00000073433 936 ntAPPRIS P1 BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Fcer1g-201ENSMUST00000079957 674 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Sncaip-203ENSMUST00000163742 3272 ntAPPRIS P3 TSL 5 BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Stx16-201ENSMUST00000044638 3731 ntAPPRIS ALT2 TSL 5 BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 C920021L13Rik-201ENSMUST00000120398 1723 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Igf2bp2-202ENSMUST00000115379 3078 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Gm30074-201ENSMUST00000193192 2541 ntTSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Aldoa-202ENSMUST00000087566 1549 ntTSL 5 BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Cyp2g1-201ENSMUST00000040944 1896 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Fmod-201ENSMUST00000048183 3120 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Psd-201ENSMUST00000041391 3900 ntAPPRIS P3 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 D2hgdh-202ENSMUST00000112881 3459 ntAPPRIS ALT2 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Son-201ENSMUST00000114036 7945 ntTSL 5 BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Trim34a-201ENSMUST00000060315 2590 ntAPPRIS P1 TSL 1 (best) BASIC8.69□□□□□ -1.02
Usf3B2RUQ2 Gm37583-201ENSMUST00000195460 2487 ntBASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Dffa-201ENSMUST00000030816 2457 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Gm19951-201ENSMUST00000222616 1328 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Pms1-201ENSMUST00000027267 3054 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Gm10643-201ENSMUST00000098592 1577 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Polr1e-203ENSMUST00000107814 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Slit2-208ENSMUST00000173107 9960 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Etnppl-203ENSMUST00000166187 1712 ntAPPRIS P2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 D030028A08Rik-202ENSMUST00000131501 3542 ntTSL 2 BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Itpa-201ENSMUST00000103193 1390 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Cenpx-204ENSMUST00000106155 700 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Sfxn5-204ENSMUST00000113788 514 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Mir1190-201ENSMUST00000116925 96 ntBASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Gm14829-201ENSMUST00000121499 1138 ntBASIC8.68□□□□□ -1.02
Usf3B2RUQ2 AA623943-201ENSMUST00000121794 354 ntBASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Gm13031-201ENSMUST00000140501 924 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Platr20-202ENSMUST00000143209 937 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Tstd1-201ENSMUST00000171362 551 ntAPPRIS P1 TSL 2 BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Vmn2r-ps9-201ENSMUST00000177446 1099 ntBASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Gm44640-201ENSMUST00000206894 247 ntBASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Klk1b24-201ENSMUST00000073713 878 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Ccl27a-201ENSMUST00000074387 405 ntAPPRIS P3 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Klk1b21-201ENSMUST00000085455 871 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Afap1-201ENSMUST00000064571 6618 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Agbl4-203ENSMUST00000106587 2631 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Stk26-201ENSMUST00000033444 3639 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Ankrd46-201ENSMUST00000057486 2509 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Tmem131l-203ENSMUST00000192095 4774 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 B630019A10Rik-201ENSMUST00000149488 2407 ntTSL 2 BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Tti2-204ENSMUST00000210129 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Pdzd7-202ENSMUST00000145391 4088 ntAPPRIS P1 TSL 5 BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Cep250-201ENSMUST00000039994 7979 ntAPPRIS ALT2 TSL 5 BASIC8.68□□□□□ -1.02
Usf3B2RUQ2 Snx31-203ENSMUST00000161202 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC8.68□□□□□ -1.02
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms